Pairwise Alignments

Query, 496 a.a., ribosome biogenesis GTPase Der from Pantoea sp. MT58

Subject, 437 a.a., putative phosphoglycerate dehydrogenase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  296 bits (759), Expect = 7e-85
 Identities = 175/467 (37%), Positives = 269/467 (57%), Gaps = 40/467 (8%)

Query: 4   VVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGREFIVIDTGG-IDG 62
           +VA+VGRPNVGKSTLFNRLT+TR A+V +  G TRDR+YG++E  GREF V+DTGG +  
Sbjct: 4   LVAIVGRPNVGKSTLFNRLTKTRQAIVNEEAGTTRDRQYGKSEWLGREFSVVDTGGWVVN 63

Query: 63  TEEGVETRMAEQSLLAIEEADVVLFMVDARAGMMAADQQIAKHLRSRQKATFLVANKTDG 122
           +++  E  + +Q LLA+EEADV+LF+VD   G+   D Q+A  LR       +VANKTD 
Sbjct: 64  SDDIFEEEIRKQVLLAVEEADVILFVVDVMNGVTDLDMQVATILRRANSPVIMVANKTDN 123

Query: 123 MDPDQAIVDFYSLGLGEIHAIAASHGRGVSSLIEEALLPWMEKVEAVELTEEEENQAYWA 182
            +      +FY LGLG+ + I+A  G G   L++              L   + N+    
Sbjct: 124 NELQYNAPEFYKLGLGDPYCISAITGSGTGDLMD--------------LIVSKFNK---- 165

Query: 183 ALEADEIAEQEAAEEEENFDPTGLPIKLAIVGRPNVGKSTLTNRILGEDRVVVYDMPGTT 242
             E  EI + +               + A+VGRPN GKS++ N  +GEDR +V ++ GTT
Sbjct: 166 --ETSEILDDDIP-------------RFAVVGRPNAGKSSIVNAFIGEDRNIVTEIAGTT 210

Query: 243 RDSIYIPMERDGREYVLIDTAGVRKRAKISDTVEKFSVIKTLQAIEDANVVMLVIDAHAG 302
           RDSIY    + G ++ L+DTAG+RK+ K+++ +E +SV++++++IE+A+V +L++DA  G
Sbjct: 211 RDSIYTRYNKFGFDFYLVDTAGIRKKNKVNEDLEYYSVVRSIRSIENADVCILMLDATRG 270

Query: 303 ISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVRDEVKE---TLDFRLG-FIDFARIHFI 358
           +  QDL++L  I  + + LV+V+NKWD +  +    +KE   T+  R   F+DF  I F 
Sbjct: 271 VESQDLNILSLIQKNQKGLVVVINKWDLIEDKTAKMMKEFEATIRSRFAPFVDFP-IIFA 329

Query: 359 SALHGSGVGNLFESITEAYDCSTRRVNTSLLTRIMNMAADDHQPPLVRGRRVKLKY-AHA 417
           SAL    +  + E     Y+  T ++ T+ L   M    + + PP  +G+ +K+KY    
Sbjct: 330 SALTKQRILKVLEEARNVYENRTTKIPTARLNEEMLPLIEAYPPPSNKGKYIKIKYITQL 389

Query: 418 GGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLNVMGTPIRIQFKE 464
                P  V   N  + + + YKR+L N  R+  N+ GTPI I  ++
Sbjct: 390 PNTQVPSFVYFANLPQYVKEPYKRFLENKMREKWNLTGTPINIYIRQ 436



 Score = 75.5 bits (184), Expect = 4e-18
 Identities = 44/123 (35%), Positives = 65/123 (52%), Gaps = 3/123 (2%)

Query: 2   VPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAEVEGREFIVIDTGGI- 60
           +P  A+VGRPN GKS++ N        +V +  G TRD  Y R    G +F ++DT GI 
Sbjct: 175 IPRFAVVGRPNAGKSSIVNAFIGEDRNIVTEIAGTTRDSIYTRYNKFGFDFYLVDTAGIR 234

Query: 61  --DGTEEGVETRMAEQSLLAIEEADVVLFMVDARAGMMAADQQIAKHLRSRQKATFLVAN 118
             +   E +E     +S+ +IE ADV + M+DA  G+ + D  I   ++  QK   +V N
Sbjct: 235 KKNKVNEDLEYYSVVRSIRSIENADVCILMLDATRGVESQDLNILSLIQKNQKGLVVVIN 294

Query: 119 KTD 121
           K D
Sbjct: 295 KWD 297