Pairwise Alignments

Query, 250 a.a., tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ from Pantoea sp. MT58

Subject, 245 a.a., RNA methyltransferase TrmH, group 1 from Synechococcus elongatus PCC 7942

 Score =  105 bits (263), Expect = 7e-28
 Identities = 71/249 (28%), Positives = 120/249 (48%), Gaps = 11/249 (4%)

Query: 4   NIRIVLVETSHTGNMGSVARAMKTMGLTNLYLVNPLVK-PDSQAISLAAGASDVIGEAKI 62
           ++RIVLVE +   N+G++AR M   GL++  +V P       +A  +A  A+ ++ +A +
Sbjct: 2   SLRIVLVEPAGARNVGAIARVMMNFGLSDWAIVRPRCDIHGGEARQMAVHAAALLEQAVL 61

Query: 63  VDSLDEAIAGCSLVVGTSARSRSLPWPMLDARECGVKSVEEGQQAPVALVFGRERVGLTN 122
           VD+L  A+ GC  V  T+ +      P+    E   + +   +Q P AL+FGRE  GL  
Sbjct: 62  VDNLPSALEGCQWVAATTGQRDLRDLPL----ESPTQILPWLRQGPAALIFGREDSGLQR 117

Query: 123 EELQKCHYHVAIQANPEYSSLNLAMAVQIIAYEVRMAWLQSQEQASPAPKYEESPYPL-- 180
            EL     ++    +P Y SLNLA AV +  Y        S+  +   P+ E SP  +  
Sbjct: 118 SELSLAQRYLTFPTDPAYPSLNLAQAVGLCCYHYACL---SEADSRGVPQQESSPAAVRA 174

Query: 181 -VDDLERFYQHMEQMMLNSGFIREANPGQVMSKLRRLYTRARPERDELNILRGMLSSFEK 239
             + L  +   +E ++L  G++        M K+R +  R+    +E+ +LRGM+     
Sbjct: 175 AFEQLHGYTSDLEALLLRVGYLHSHTAASRMEKIRAIAQRSALTAEEVALLRGMVRQLNW 234

Query: 240 RKNEKKEAD 248
             N+   +D
Sbjct: 235 ALNQVPSSD 243