Pairwise Alignments

Query, 250 a.a., tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ from Pantoea sp. MT58

Subject, 246 a.a., rRNA methylase from Sphingomonas koreensis DSMZ 15582

 Score =  116 bits (290), Expect = 5e-31
 Identities = 85/244 (34%), Positives = 128/244 (52%), Gaps = 17/244 (6%)

Query: 7   IVLVETSHTGNMGSVARAMKTMGLTNLYLVNPLVK-PDSQAISLAAGASDVIGEAKIVDS 65
           IVLV      N+G  ARAM   GLT + LV P    P+  A   A+GA  V+ +A++  S
Sbjct: 10  IVLVRPQLGENIGKAARAMLNFGLTEMRLVTPRDGWPNPSAGPAASGADVVLEQARVFGS 69

Query: 66  LDEAIAGCSLVVGTSARSRSLPWPMLDARECGVKSVEEGQQAP--VALVFGRERVGLTNE 123
           + +A+A C  V  T+ R R +  P++      V++  E   AP   A++FG ER GL  E
Sbjct: 70  VADAVADCEHVYATTVRKRGVTKPVVTP----VQAAGEIHAAPGRSAILFGPERSGLETE 125

Query: 124 ELQKCHYHVAIQANPEYSSLNLAMAVQIIAYEVRMAWLQSQEQASPAPKYEESPYPLVDD 183
           ++      + +  NPE+ SLNLA AV ++AYE    W + +E A P P+ +  P  L  +
Sbjct: 126 DVALARAILTVPINPEFGSLNLAQAVILVAYE----WSKGRELAQP-PRVDLDPPALQAE 180

Query: 184 LERFYQHMEQMMLNSGFIREANPGQVMS---KLRRLYTRARPERDELNILRGMLSSFEKR 240
           LE    H+E ++ +SG+     P +V +    LR L T+      EL  LRG+LS+ E +
Sbjct: 181 LEGLIGHLEMLLEDSGYFYP--PDRVPTTKLTLRNLLTKPGWTEQELRTLRGVLSALEGK 238

Query: 241 KNEK 244
           K  +
Sbjct: 239 KRAR 242