Pairwise Alignments

Query, 511 a.a., multidrug efflux MFS transporter permease subunit EmrB from Pantoea sp. MT58

Subject, 511 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

 Score =  400 bits (1028), Expect = e-116
 Identities = 201/497 (40%), Positives = 304/497 (61%), Gaps = 5/497 (1%)

Query: 4   KPLEGMPLVLMTVALSLATFMQVLDSTIANVAIPTIAGNLGASNSQGTWVITSFGVANAI 63
           +PL G  L    + L++A F+ +LD+TIANV++  IAG+LG S SQGT+VITS+ VA AI
Sbjct: 10  QPLSGWALFFGALCLAMANFLAILDTTIANVSVSNIAGSLGTSTSQGTYVITSYAVAEAI 69

Query: 64  SIPLTGWLAKRIGEVKLFTWSTILFAIASWACGMSDSLEMLIFFRVIQGIVAGPLIPLSQ 123
           S+PLTGWLA R G +++F    +LF + S  CG+++S+  L+ FRV+ G V GPL+PLSQ
Sbjct: 70  SVPLTGWLASRFGSIRVFVTCFLLFGVFSLLCGLANSMSTLVMFRVLLGFVGGPLMPLSQ 129

Query: 124 SLLLNNYPPAKRSLALSLWAMTVIVAPICGPILGGWISDNYHWGWIFFINVPIGVAVVIL 183
           +L++  +P  K   A+ +W+MT +VAPI GPILGG + D   W +IFFI +P  +A  +L
Sbjct: 130 TLMIRIFPKNKSHAAIGIWSMTTLVAPIMGPILGGVLCDQLSWPYIFFIKMPFAIAAALL 189

Query: 184 TLQTLRGRETKTEIRRIDMVGLVLLVVGIGCLQVMLDRGKELDWFNSVEIIVLGVVALIA 243
             + L+  ETKT   +ID VGL LLVV +  LQ+MLD GK+ DWF S  I+ L V+A+I 
Sbjct: 190 CWKLLKKFETKTTHSKIDKVGLALLVVWVAALQLMLDEGKDHDWFESSRIVFLAVIAVIG 249

Query: 244 LTVLLVWELTDDHPIIDLSLFKSRNFTIGCLSISLAYMLYFGSIVLLPQLLQEVYGYTAT 303
               L+WELT+ +P++DL +F+ R ++I  +++SLA+  +F   V+ P  LQ   GYTAT
Sbjct: 250 FIAFLIWELTERNPVVDLKVFRHRGYSISMVTLSLAFGAFFSISVVTPLWLQIYMGYTAT 309

Query: 304 WAGLASAPVGIIPVILSPIIGRFAHKLDMRRLVTFSFIMYAICFYWRAYTFEPGMDFGAS 363
            +G A+A +GI+ V L+PI+   + K D R  V    +   +  + R +     M F   
Sbjct: 310 ISGHATASMGILAVFLAPIVANLSSKFDPRPFVFAGVMWLGLWTFMRGFN-TVDMTFSQI 368

Query: 364 AWPQFIQGFAVACFFMPLTTITLSGLPPERMAAASSLSNFMRTFAGSVGTSITTTMWTNR 423
           +WP F QG  +  FF+PLT I L  + P  M +A+ L NF+RT +G+  TS+  T W + 
Sbjct: 369 SWPLFFQGIGMPLFFVPLTAIALGSVKPHEMESAAGLMNFIRTLSGAFATSMINTSWEHE 428

Query: 424 ESMHHSYMTESITPYNVNSQQMYSQLESLGMTQQQASAYIAQQITNQGLIISANEIFWAS 483
               H+ +        V +Q M    ++ GM+ +Q  + +   + NQ ++++ N++F   
Sbjct: 429 TRYVHAELAGLTDKAGVATQAM----QNSGMSAEQTRSAMDWILQNQSVMVATNQLFIVI 484

Query: 484 AGVFLILLVLIWFARPP 500
           A +F+    +IWFA  P
Sbjct: 485 ALIFVFAACMIWFAPKP 501