Pairwise Alignments

Query, 579 a.a., outer membrane protein assembly factor from Pantoea sp. MT58

Subject, 582 a.a., outer membrane protein assembly factor from Vibrio cholerae E7946 ATCC 55056

 Score =  441 bits (1135), Expect = e-128
 Identities = 231/564 (40%), Positives = 339/564 (60%), Gaps = 11/564 (1%)

Query: 18  ALEAATVRLQVDGLTGDLQKNVRARLSTIGSDEVSNDGRFRARVSVAIKEGLRALGYYEP 77
           A+  A V+L++ G++G  + NV A LS+I + + S   RF++++  ++ E L ALGYY P
Sbjct: 28  AVSYADVKLEITGISGAEKDNVEAYLSSIAAQDYSTSLRFQSQLERSMTEALNALGYYHP 87

Query: 78  TIDFESRPAPAKGGRPVLVAHVTPGEAVKIGGSTIVVEGDARNDPDYKAWVKQGRPKVGT 137
           +IDF       +     L A VT GE  ++    IV+ G+A  D D++  +++   +V  
Sbjct: 88  SIDFTVSEDNQR-----LRAAVTLGEVTRLSEVDIVIRGEAEGDRDFQRLIRRSGLRVDA 142

Query: 138 QLNHGQYDKFKSGFSNLALRNGYFDGTFKKSQLGVSVERHEAFWDIDYDSGERYRFGDVT 197
            LNH  YD  KSG  NLAL+ GYF+G F+ S+L V  E ++A   + +DSG RY FG  T
Sbjct: 143 PLNHSLYDNLKSGIRNLALQKGYFNGDFQASRLEVIPELNQARVILHFDSGIRYLFGATT 202

Query: 198 FQGSQIREEYLQNLVPFKEGDYYSSRDLAELNRRLSATGWFNSVVVAPEFSKGRQTKVLP 257
            +GSQI E  + +L PFK+G+ Y    + E N+ LS T WF+SV V P+ S+  + + LP
Sbjct: 203 VEGSQIDENRVMSLRPFKQGEPYLVSQVGEFNQNLSNTDWFSSVFVEPDLSQLDEGRELP 262

Query: 258 LSAVMSPRTENTIETGVGYSTDVGPRLKGTWKKPWINDSGHSLTASAYVSAPEQQVDLSY 317
           +   ++P+  N +ETG+GYSTDVG R    WKKPW+N  GHS  +S  +S PEQ +   Y
Sbjct: 263 IKVTLAPQARNQLETGLGYSTDVGVRGSLKWKKPWVNSQGHSFDSSFSLSIPEQTITAGY 322

Query: 318 KVPLLKSPLEQYYTFSGGLKRTDLNDTKADTTTLAMSRNWDSSSGWQKAVNLRWSLDHFT 377
           K+P L+  L +YY    G+K  D  DT++  + L++ R+W    GW + V +R+ L+++ 
Sbjct: 323 KIP-LEDALNEYYRIQYGMKHLDKRDTESLESNLSLERHWQLDGGWHRTVFIRYLLENYR 381

Query: 378 QGSVTNTTMLLYPGVSVNRTRSR--GGLMPTWGDSQRYSVDVSDTTWGSDVDFLILQAQN 435
           QG   + +  L PG++  RTR+R   GL+ TWGD Q  +++  D    S+   L LQ  +
Sbjct: 382 QGLQDDNSQFLLPGMTYTRTRTRSNSGLL-TWGDKQTITLEYGDPALLSETRVLRLQTGS 440

Query: 436 VWIRTLGDSHRFVARGNLGWIETNDFDKVPPDLRFFAGGDRSIRGYKYKNISPRDDDGKL 495
            W+RT   +HR + R + G    ++FD++ P LRFFAGGD ++RGY YK+ISP+D  G L
Sbjct: 441 SWLRTYARNHRALVRVDGGANLVDEFDQLSPSLRFFAGGDNNLRGYGYKSISPQDASGAL 500

Query: 496 TGASKLATGSLEYQYNVTGKWWGAVFVDSGEAVNDIKQSNIKTGAGVGVRWSSPVGPIKF 555
           TGA  +AT S+EYQY +TG WW A+F+D G+A ND      K G G G+RW SPVGPI+ 
Sbjct: 501 TGAKYIATSSIEYQYRLTGNWWAAMFMDVGDAFND--NPEWKKGVGTGIRWISPVGPIRL 558

Query: 556 DIARPIGDDEEHGLQFYVGLGPEL 579
           D A  +        + +  LGPEL
Sbjct: 559 DFAWGLDAAPGDEFKIHFTLGPEL 582