Pairwise Alignments

Query, 244 a.a., 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB from Pantoea sp. MT58

Subject, 252 a.a., rRNA methylase, putative, group 3 from Sphingomonas koreensis DSMZ 15582

 Score =  135 bits (339), Expect = 1e-36
 Identities = 94/236 (39%), Positives = 127/236 (53%), Gaps = 11/236 (4%)

Query: 6   FGIHAVQALLERDPQRFQEVFILKGRDDRRLQPVVAALEAQGIV-IQLAERKWLDSQVEG 64
           +G HAV A L    +  ++V+          +  +AAL+   ++ I  A+   L   V  
Sbjct: 24  WGRHAVTAALANPERTVRKVW--------GTREALAALDLPPVLPITYADVADLARMVPS 75

Query: 65  GV-HQGIVARVKPGRQYQEGDLPDLLQSLDKPFLLVLDGVTDPHNLGACLRSADAAGVHA 123
              HQG+V  V P  +   GDL +      +P LLVLD VTDPHN+GA LRSA A     
Sbjct: 76  DAPHQGLVIEVDPLEEIWLGDLLESGADDRRP-LLVLDHVTDPHNVGAILRSAAAFDALG 134

Query: 124 IIVPKDRSAPLNATAKKVASGAAENVPLIRVTNLARTLRLLQEYNIWVVGTAGEADHTVF 183
           I+     + P + +  + ASGA E VP +RV NLAR L  + E   W +G AGEA  T+ 
Sbjct: 135 IVTQDRHAPPESGSLARSASGALELVPWVRVVNLARALDEIGEAGFWRIGLAGEAKGTLA 194

Query: 184 QSKMTGPMALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGVCLFEAV 239
           +       ALV+GAEGEGMR  T +HCDEL  +P++  V SLNVS A  + L+ AV
Sbjct: 195 EVMGDTRPALVLGAEGEGMRHNTAQHCDELARLPISPRVESLNVSNAAAIALYAAV 250