Pairwise Alignments

Query, 829 a.a., ribonuclease R from Pantoea sp. MT58

Subject, 756 a.a., putative ribonuclease R from Phaeobacter inhibens DSM 17395

 Score =  356 bits (914), Expect = e-102
 Identities = 262/781 (33%), Positives = 379/781 (48%), Gaps = 56/781 (7%)

Query: 18  IPSREFILALLEKREKPASREELAEEMNLQEEEHLEALRRRLRAMERDGQLVFTRRQCYA 77
           IPS+  IL  +       S+ ++A+   ++  + ++ L+R L+ +E +G L   R++ Y 
Sbjct: 4   IPSKAEILDWIAAHPTHTSKRDIAKAFGIKGSDRID-LKRILKELEAEGHLE-KRKKTYR 61

Query: 78  LPERLDLLRGKVIGHRDGYGFLRA-------EGQKDDLYLSAEQMKFCM-HGDVILAQ-P 128
            PERL  +    I   DG G L A       EG +  + +        +  GD ILA+  
Sbjct: 62  DPERLPPVSVLQIKAPDGDGDLFARPLEWHGEGVEPVVLVMPRASDPALGEGDRILARLT 121

Query: 129 LGADRKGRREARVVRVQEPRNNQIVGRYFTDAGAGFVVPDDSRLSFDILIPPEETMNARM 188
           +  D +   EAR++R       +++G +      G +VP D   S +  +    T  AR 
Sbjct: 122 VVQDAEYHYEARLIRRIGTNPRRVIGIFRKGDEGGRIVPIDKSASTEWAVAENATHGARD 181

Query: 189 GSVVVVELVQRPNRRSKAIGKIAEILGDDMGTSLAVDMALRTHEIPHTWPPEVEAQISKL 248
           G +V  E     +R      ++ E LGD         +A+  H I   +P EV A+    
Sbjct: 182 GELVEAEQAGPKSRLGLPRARVVERLGDPSAPKAVSLIAIHQHGILDHFPDEVIAEADAA 241

Query: 249 KEEVPEEAKKGRVDLRKLPLVTIDGEDARDFDDAVYC----EKKRGGGWRLWVAIADVSY 304
           K        KGR DLR LPL+TID  DARD DDA Y     + K  GG  +WVAIADV+ 
Sbjct: 242 KPM----GLKGREDLRDLPLITIDPADARDHDDACYAHADDDPKNPGGHVIWVAIADVAA 297

Query: 305 YVRPGTPLDDEAHQRGTSVYFPSQVVPMLPEVLSNGLCSLNPQVDRLCMVCEMTISTKGK 364
           YV+PG+ LD  A +RG S YFP +VVPMLP+ LS  LCSL+  V R C+   M I   G 
Sbjct: 298 YVQPGSALDRAARKRGNSSYFPDRVVPMLPDRLSGDLCSLHEGVPRACVAVRMQIDADGN 357

Query: 365 LTGFKHYEAVMNSHARLTYNKVWNILQGDKELRQQ--YAPLVKDLEELNNLYHALEAARE 422
               +    +M S A L Y +V   + G    R      P++K L      Y AL  AR 
Sbjct: 358 KIAHRFVRGLMRSAASLHYAEVQEAMDGAPTDRTGPFLEPVIKPLYAA---YAALVKARA 414

Query: 423 ERGGISFETEEAKFIFNAERRIERVERASRNDAHKLIEECMILANIASARFVEKNQEPAL 482
           ER  +  +  E K + + +  +  V    R DAHKLIEE M+LAN+A+A  + K + P L
Sbjct: 415 ERQPLDLDLPERKIVLDEKGTVASVNFRDRLDAHKLIEEFMVLANVAAAETLIKKRTPLL 474

Query: 483 FRDHDRPTDESIKSFRTVLNELGLTLPGGNKPQPVDYAALLKQVADRPDAEMLQTMLLRS 542
           FR H+ P+ E +++ R      GL L  G   Q     ALL   A   DAE++    LRS
Sbjct: 475 FRVHEEPSPEKLEALRETARAAGLALAKGQVLQTRHLNALLHGAAGTDDAELINISTLRS 534

Query: 543 MKQAVYDPENRGHFGLALSSYAHFTSPIRRYPDLTLHRAIKYLLAKEQGEGKGLVQRAIK 602
           M+QA Y PEN GHFGLAL +YAHFTSPIRRY DL +HRA+  + A   G+          
Sbjct: 535 MQQAYYGPENFGHFGLALRNYAHFTSPIRRYADLIVHRAL--ITAHGWGD---------- 582

Query: 603 YLMPKDKNAKDLTTATGGYHYDMPEMLQLGLHCSLTERRADEATRDVADWLKCDFMQDQV 662
                      L TA      ++  + Q   H S TERR+  A RD  D     ++ ++V
Sbjct: 583 ---------DGLDTA------EIERLEQTATHISETERRSMMAERDTTDRYLAAYLAERV 627

Query: 663 GNVFNGVISSVTGFGFFVRLSDLFIDGLVHVSTLDNDYYRFDPVGQRLIGESGGRTYRLG 722
           GN F G IS +  FG FV+L +   DGLV V ++  +++ FD     L+G   G    +G
Sbjct: 628 GNEFEGRISGIARFGAFVKLDETGADGLVPVRSIGREFFHFDAEAGTLMGADTGLIIAIG 687

Query: 723 DTVEVRVEAVHMDERKIDFALISSQRQVRGEG-----KTARDRAKRDDNAPTKRRRNASR 777
             V+VR+         ++  L+S + +    G     ++   R+ +  +A  K +R+  +
Sbjct: 688 QRVKVRLAQATPVTGGLELELLSIEDKPMPAGGGGGRRSPAGRSVKRKSAKAKAKRSKIK 747

Query: 778 K 778
           +
Sbjct: 748 R 748