Pairwise Alignments

Query, 829 a.a., ribonuclease R from Pantoea sp. MT58

Subject, 813 a.a., exoribonuclease R from Marinobacter adhaerens HP15

 Score =  735 bits (1897), Expect = 0.0
 Identities = 398/808 (49%), Positives = 520/808 (64%), Gaps = 34/808 (4%)

Query: 40  LAEEMNLQEEEHLEALRRRLRAMERDGQLVFTRRQCYALPERLDLLRGKVIGHRDGYGFL 99
           +  E+    EE +EALRRRL AM RDGQL+  RR  Y   E  DL+ G+VIGH+DG+GFL
Sbjct: 1   MCSELGQSSEEGIEALRRRLIAMCRDGQLICNRRGAYLPIEEADLVTGRVIGHKDGFGFL 60

Query: 100 RAEGQKDDLYLSAEQMKFCMHGDVILAQPLGADRKGRREARVVRVQEPRNNQIVGRYFTD 159
             +    DL+L+A QM+   HGD + A+    D +GRRE  +V V E R +Q VGR+F +
Sbjct: 61  VPDDGGSDLFLTARQMRQVFHGDRVAARVDRVDDRGRREGVIVEVLEYRTSQTVGRFFQE 120

Query: 160 AGAGFVVPDDSRLSFDILIPPEETMNARMGSVVVVELVQRPNRRSKAIGKIAEILGDDMG 219
           +G  FVVP+++R++ ++LIP E   NAR G  VVV++V++P  R++ +GK+ E+LG+ M 
Sbjct: 121 SGISFVVPENARINHEVLIPQENCGNARHGQYVVVDIVRQPTVRTQPLGKVVEVLGEHMA 180

Query: 220 TSLAVDMALRTHEIPHTWPPEVEAQISKLKEEVPEEAKKGRVDLRKLPLVTIDGEDARDF 279
             + +D+A+R+++IPH+WPP V  Q + + EEV E+ K  R D+R L LVTID E ARDF
Sbjct: 181 PGMEIDVAIRSYDIPHSWPPAVGEQTAAIPEEVTEKDKVNRKDIRNLRLVTIDDETARDF 240

Query: 280 DDAVYCEKKRGGGWRLWVAIADVSYYVRPGTPLDDEAHQRGTSVYFPSQVVPMLPEVLSN 339
           DDAVYCE +  GG+RL VAIADVS+YVRPGTPLD+EA  R TSVYFP  VVPMLPE LSN
Sbjct: 241 DDAVYCEPRARGGYRLLVAIADVSHYVRPGTPLDEEAVNRSTSVYFPDHVVPMLPEKLSN 300

Query: 340 GLCSLNPQVDRLCMVCEMTISTKGKLTGFKHYEAVMNSHARLTYNKVWNIL------QGD 393
           GLCSLNP VDRLCMV +MTIS  G ++ +  Y+AVM SHARLTYNKV  +L      QG 
Sbjct: 301 GLCSLNPGVDRLCMVADMTISAAGNISSYSFYQAVMFSHARLTYNKVSTMLEHPDTEQGY 360

Query: 394 KELRQQYAPLVKDLEELNNLYHALEAAREERGGISFETEEAKFIFNAERRIERVERASRN 453
           K L +QYA ++  L  L  LY  L  AR ERG I FET E K +F+A+R+IE +    RN
Sbjct: 361 K-LCEQYANVLPQLHNLYGLYQLLRKARTERGAIDFETTETKIVFDADRKIEEIVPVQRN 419

Query: 454 DAHKLIEECMILANIASARFVEKNQEPALFRDHDRPTDESIKSFRTVLNELGLTLPGGNK 513
           DAHK+IEECM+ AN+A+ARF++K++ PAL+R HD P++E + + R  L ELGL L GG+ 
Sbjct: 420 DAHKIIEECMLCANVATARFLKKHKLPALYRVHDGPSEERLNAVRLFLGELGLQLGGGDS 479

Query: 514 PQPVDYAALLKQVADRPDAEMLQTMLLRSMKQAVYDPENRGHFGLALSSYAHFTSPIRRY 573
           P   DY  LL  + DR DA ++QT++LRS+ QAVY PE  GHFGL  + YAHFTSPIRRY
Sbjct: 480 PTSADYQELLNSIKDRSDANVIQTVMLRSLSQAVYSPEEGGHFGLGYAGYAHFTSPIRRY 539

Query: 574 PDLTLHRAIKYLLAKEQGEGKGLVQRAIKYLMPKDKNAKDLTTATGGYHYDMPEMLQLGL 633
           PDL  HRAIK ++   Q           K ++P  K   +L      Y YDM  M QLG 
Sbjct: 540 PDLINHRAIKSVIHGGQPS---------KDVVPPPKPDPELAE----YPYDMARMEQLGE 586

Query: 634 HCSLTERRADEATRDVADWLKCDFMQDQVGNVFNGVISSVTGFGFFVRLSDLFIDGLVHV 693
           H S+ ERRAD+ATRDV  WLKC+++ D VG  ++GVI+SV  FGFFV LS ++I+GLVHV
Sbjct: 587 HTSMAERRADDATRDVMAWLKCEYLSDHVGEEYDGVIASVVPFGFFVELSGVYIEGLVHV 646

Query: 694 STLDNDYYRFDPVGQRLIGESGGRTYRLGDTVEVRVEAVHMDERKIDFALISS--QRQVR 751
           STL  D++  D    RLIGE    ++RLGD V V+V  V M++RKID  LIS    RQ  
Sbjct: 647 STLSGDFFHHDSAKHRLIGERTAMSFRLGDEVRVKVVRVGMEDRKIDLELISEPVHRQAD 706

Query: 752 GEGKTARDRAKR--DDNAPTK-----RRRNASRKSNFEPDSAFRGDKGKPAAADSANK-- 802
            +     D+ +R      P K      R    +KS    +   +  + +PA+A S  K  
Sbjct: 707 RDALKVPDKGERGKGKRGPGKGGKPPGRTKPGQKSASPGEPGLKRPRKRPASASSKKKGP 766

Query: 803 ---SKNVSEKTRKIAAATRAKRARKKAQ 827
                N +   R    A  AK A KK +
Sbjct: 767 EAFDDNETPSARDELVAKAAKLALKKGK 794