Pairwise Alignments

Query, 829 a.a., ribonuclease R from Pantoea sp. MT58

Subject, 718 a.a., ribonuclease R (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  308 bits (789), Expect = 7e-88
 Identities = 192/650 (29%), Positives = 319/650 (49%), Gaps = 44/650 (6%)

Query: 102 EGQKDDLYLSAEQMKFCMHGDVILAQPLGADRKGRREARVVRVQEPRNNQIVGRYFTDAG 161
           EG  D ++++       M+ D +        +    E  V+ + E  N+  VG       
Sbjct: 104 EGGGDPIFVAERNSAHAMNNDKVKITFYAKRKNKDAEGEVIEILERANDTFVGTLEVAKS 163

Query: 162 AGFVVPDDSRLSFDILIPPEETMNARMGSVVVVELVQRPNRRSKAIGKIAEILGDDMGTS 221
             F+V ++  L+ DI IP E+    + G   +V++ + P++    IG++ +ILG     +
Sbjct: 164 YAFLVTENRTLANDIFIPKEKLKGGKTGDKAIVKVTEWPDKAKNPIGQVIDILGVAGDNT 223

Query: 222 LAVDMALRTHEIPHTWPPEVEAQISKLKEEVPEEAKKGRVDLRKLPLVTIDGEDARDFDD 281
             +   L    +P+ +P  VE    K+  E+  E    R D RK+   TID +DA+DFDD
Sbjct: 224 TEMHAILAEFGLPYVYPKAVETAADKIPAEITPEEIARREDFRKVTTFTIDPKDAKDFDD 283

Query: 282 AVYCEKKRGGGWRLWVAIADVSYYVRPGTPLDDEAHQRGTSVYFPSQVVPMLPEVLSNGL 341
           A+     + G W + V IADV++YV+ G  +D EA +R TSVY   + +PMLPE L N +
Sbjct: 284 ALSIRPIKDGLWEVGVHIADVTHYVKEGGIIDKEAEKRATSVYLVDRTIPMLPERLCNFI 343

Query: 342 CSLNPQVDRLCMVCEMTISTKGKLTGFKHYEAVMNSHARLTYNKVWNILQGDKELRQQYA 401
           CSL P  ++L       I+ KG++   +    V+NS  R TY +   I++       +  
Sbjct: 344 CSLRPNEEKLAFSVIFDITEKGEVRDSRIVHTVINSDRRFTYEEAQQIIE------TKTG 397

Query: 402 PLVKDLEELNNLYHALEAAREERGGISFETEEAKFIFNAERRIERVERASRNDAHKLIEE 461
              +++  L+ +  AL   R   G I+F+  E KF  + + +   V      DA+KL+EE
Sbjct: 398 DFKEEVLMLDTIAKALREKRFAAGAINFDRYEVKFEIDEKGKPISVYFKESKDANKLVEE 457

Query: 462 CMILANIASAR---FVEKNQEPAL--FRDHDRPTDESIKSFRTVLNELGLTLPGGNKPQP 516
            M+LAN   A     V KN++P +  +R HD P  E +++    +   G  +        
Sbjct: 458 FMLLANRTVAEKVGRVPKNKKPKVLPYRIHDLPDPEKLENLSQFIARFGYKVRTSGTKTD 517

Query: 517 VDYAA--LLKQVADRPDAEMLQTMLLRSMKQAVYDPENRGHFGLALSSYAHFTSPIRRYP 574
           +  +   LL  +  + +  +++T+ +R+M++A Y   N GH+GLA   Y HFTSPIRR+P
Sbjct: 518 ISKSINHLLDDIHGKKEENLIETVSIRAMQKARYSTHNIGHYGLAFDYYTHFTSPIRRFP 577

Query: 575 DLTLHRAIKYLLAKEQGEGKGLVQRAIKYLMPKDKNAKDLTTATGGYHYDMPEMLQLGLH 634
           D+ +HR +                   KY+              GG      +   L  H
Sbjct: 578 DMMVHRLV------------------TKYM-------------DGGRSVSESKYEDLCDH 606

Query: 635 CSLTERRADEATRDVADWLKCDFMQDQVGNVFNGVISSVTGFGFFVRLSDLFIDGLVHVS 694
            S  E+ A  A R    + + +FM +++G +++GVIS VT +G +V L++   +G+V + 
Sbjct: 607 SSNMEQIAANAERASIKYKQVEFMSERLGQIYDGVISGVTEWGLYVELNENKCEGMVPIR 666

Query: 695 TLDNDYYRFDPVGQRLIGESGGRTYRLGDTVEVRVEAVHMDERKIDFALI 744
            LD+DYY FD     L G    + Y LGD + +RV   +++++++DFALI
Sbjct: 667 DLDDDYYEFDEKNYCLRGRRKNKIYSLGDAITIRVARANLEKKQLDFALI 716