Pairwise Alignments

Query, 366 a.a., amino acid ABC transporter permease from Pantoea sp. MT58

Subject, 365 a.a., Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine (NCBI) from Rhodospirillum rubrum S1H

 Score =  390 bits (1002), Expect = e-113
 Identities = 195/355 (54%), Positives = 243/355 (68%), Gaps = 5/355 (1%)

Query: 9   PPVPTT-PVSRAWLWARKNLFSSWFNTLLTLFCIWVIWHVIPPALNWLVFQANWIGTTRA 67
           PPV TT P++    W R+NL SS FN  LT   +W++       + W +  A +IG  + 
Sbjct: 12  PPVQTTGPIA----WIRQNLLSSPFNIALTALALWIVVSGGSSLVTWAILDATFIGEGQD 67

Query: 68  DCTKEGACWVFIHARFGQFMYGLYPHELRWRINLALVIGLVSIVPMFLKSLPYRGRYIAA 127
            C+  GACW FI  R   F YG YP   RWR+NL  ++  V++VP F+     R      
Sbjct: 68  ACSNGGACWAFIINRLDFFTYGFYPAAERWRVNLGFLMLAVALVPQFITGFSGRRALGLF 127

Query: 128 WAVIYPVIVWFLLYGGYLGLERVETRQWGGLTLTLIIASVGIAGALPLGILLALGRRSRM 187
                PVI   LL GG  GL  V+T QWGGL LTL++A VGI  ALPLG++LALGRRS M
Sbjct: 128 GLTALPVITGVLLVGGVFGLRPVDTSQWGGLMLTLVLAYVGIVAALPLGMVLALGRRSSM 187

Query: 188 PVVRTLSIIFIEFWRGVPLITVLFMSSVMLPLFMSEGTNIDKLVRALVGVILFQSAYVAE 247
           PVVR     FIE WRGVPLI+VLFM+SVMLPLF+  G   DKL+RAL+G+ LFQSAY+AE
Sbjct: 188 PVVRISCTTFIELWRGVPLISVLFMASVMLPLFLPTGVTFDKLLRALIGITLFQSAYMAE 247

Query: 248 VVRGGLQALPKGQYEAAESLALGYWKTQMLVILPQALKLTIPGLVNTIIALFKDTSLVII 307
           V+RGGLQA+P+GQ+EAA +L LG+W++  L+ILPQALKL IPG+VNT IALFKDT+LV+I
Sbjct: 248 VIRGGLQAIPRGQFEAASALGLGFWRSTGLIILPQALKLVIPGVVNTFIALFKDTTLVLI 307

Query: 308 IGLFDLFSSVQQATVDPTWLGMSTEGYVFAALVYWIFCFSMSRYSQYLEKRFHTG 362
           IGL D+  +VQ A VDP W  ++ EGY+FA   +WIFCF MSRYSQ LE + HTG
Sbjct: 308 IGLLDILGTVQSAIVDPAWSRVAVEGYIFAGFCFWIFCFGMSRYSQALESKLHTG 362