Pairwise Alignments

Query, 351 a.a., AI-2E family transporter from Pantoea sp. MT58

Subject, 377 a.a., putative permease (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 89.4 bits (220), Expect = 1e-22
 Identities = 91/352 (25%), Positives = 154/352 (43%), Gaps = 58/352 (16%)

Query: 6   REKIGQNILIKLAMLVIILAGVRAASDILVPLLLAAFFAIVLNPLVTMLMRRGFRRGLAI 65
           R  IG  +++ + MLV  L+GV      L+P  +A   A ++ PLV       F+  L +
Sbjct: 13  RGSIGCVLVVGILMLVERLSGV------LLPFFIAWLIAYMVYPLVKF-----FQYKLRL 61

Query: 66  GLVITVIFCALVLLGAIIASSMSEFSDLYPQLRATMEQKMTVL-------------QHLA 112
              I  IFC+L L+  +    +S F  L P + + + +   +L             ++L+
Sbjct: 62  KSRIVSIFCSLFLITLV---GVSLFYLLVPPMISEIGRMNDLLVTYLTNGAGNNVPKNLS 118

Query: 113 AGFHINISTDAL------------VQRFDPNTMMNLASVALSGFSGAMTNTVLLVLTVVF 160
              H NI   AL            ++   P     LA      FS   +  +LL +  + 
Sbjct: 119 EFIHENIDLQALNRILSEENILAAIKDTVPRVWALLAESLNILFSILASFIILLYVIFIL 178

Query: 161 MLFEV------HHLPYKMRNALVNPKIRIAGLHKALKGVTHYLALKTLVSLITGIAVWLS 214
           + +EV      H LP K R    N       +H    G+  Y   + LV+   GI   + 
Sbjct: 179 LDYEVIAEGWLHLLPNKYRTFASNL------VHDVQDGMNRYFRGQALVAFCVGILFSIG 232

Query: 215 LYLLDVKFALLWGVVAFILNFIPNIGPIIAGIPPLLQALLL------NSLFDAAMVAALF 268
             ++D   A+  G+    LN +P +  II  +P +L A+L       N     A   A+F
Sbjct: 233 FLIIDFPMAIALGLFIGALNMVPYL-QIIGFLPTVLLAILKAADTGENFWIIIACALAVF 291

Query: 269 TAIHMVFGNMLEPRLMGRGLGLSTLVVFLSLVFWGWLLGPVGMLLSVPLTSI 320
             + ++    L P++MG+  GL+  ++ LSL  WG L+G +GM++++PLT++
Sbjct: 292 AIVQIIQDTFLVPKIMGKITGLNPAIILLSLSIWGSLMGMLGMIIALPLTTL 343