Pairwise Alignments

Query, 91 a.a., DNA-directed RNA polymerase subunit omega from Pantoea sp. MT58

Subject, 119 a.a., DNA-directed RNA polymerase omega chain from Caulobacter crescentus NA1000

 Score = 61.6 bits (148), Expect = 2e-15
 Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)

Query: 1  MARVTVQDAVEKVGNRFDLVLVAARRARQMQVGGKDPLVPEENDKPTVIALREIEEGLVT 60
          MARVTV+D VEKV NRF LVL++A RAR +  G    +V  +NDK  V+ALREI + ++ 
Sbjct: 1  MARVTVEDCVEKVPNRFALVLLSAHRARGISAGAA-LMVDRDNDKNPVVALREIADDVID 59

Query: 61 NQILD---VRDRQEQQEQEAAELQAVT 84
          ++ L    +   Q   E   AE +A T
Sbjct: 60 HEGLKEHLISTLQRVDEHTEAEEEAET 86