Pairwise Alignments

Query, 802 a.a., DNA topoisomerase (ATP-hydrolyzing) subunit B from Pantoea sp. MT58

Subject, 814 a.a., DNA gyrase subunit B (EC 5.99.1.3) from Xanthomonas campestris pv. campestris strain 8004

 Score =  963 bits (2489), Expect = 0.0
 Identities = 495/805 (61%), Positives = 615/805 (76%), Gaps = 6/805 (0%)

Query: 2   SNSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCSDIVV 61
           + +YDSS I VL+GL+AVRKRPGMYIGD  DGTGLHHMVFEVVDN++DEALAGH  DIVV
Sbjct: 12  NGTYDSSKITVLRGLEAVRKRPGMYIGDVHDGTGLHHMVFEVVDNSVDEALAGHADDIVV 71

Query: 62  TIHADNSVSVQDDGRGIPTGIHEEEGISAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVS 121
            IH D SV+V D+GRG+P  IH+EEG+SAAEVI+TVLHAGGKFDDNSYKVSGGLHGVGVS
Sbjct: 72  KIHVDGSVAVSDNGRGVPVDIHKEEGVSAAEVILTVLHAGGKFDDNSYKVSGGLHGVGVS 131

Query: 122 VVNALSQKLELTIRREGKVHQQVYVHGVPQSPLAVTGETDITGTRVRFWPSHETFTNVRD 181
           VVNALS+ L L I R+G  +QQ Y  G PQ PL     +   GT +RF P+ E F++V +
Sbjct: 132 VVNALSEHLWLDIWRDGFHYQQEYALGEPQYPLKQLEASTKRGTTLRFKPAVEIFSDV-E 190

Query: 182 FEYDILAKRLRELSFLNSGVSIRLEDKR-DGKNDHFHYEGGIRAFVEYLNKNKTPIHPTV 240
           F YDILA+RLRELSFLNSGV I L D+R +G+ D FHYEGGIR+FVE+L + KTP+HP V
Sbjct: 191 FHYDILARRLRELSFLNSGVKIALIDERGEGRRDDFHYEGGIRSFVEHLAQLKTPLHPNV 250

Query: 241 FYFSTEKDGIGVEVALQWNDGFQENIYCFTNNIPQRDGGTHLAGFRAAMTRTLNAYMDKE 300
              + E +GI V+VALQW D +QE +YCFTNNIPQ+DGGTHLAGFR A+TR L+ Y+++ 
Sbjct: 251 ISVTGEHNGIVVDVALQWTDAYQETMYCFTNNIPQKDGGTHLAGFRGALTRVLSNYIEQN 310

Query: 301 GYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKSAVEQQMNELLAEY 360
           G +K+AK++ TGDD REG+IAV+SVKVPDP FSSQTK+KLVSS+V+ AVE      L E+
Sbjct: 311 GIAKQAKITLTGDDMREGMIAVLSVKVPDPSFSSQTKEKLVSSDVRPAVENAFGARLQEF 370

Query: 361 LLENPSDAKIVVGKIIDAARAREAARRAREMTRRKGALDLAGLPGKLADCQERDPALSEI 420
           L ENP++AK + GKI+DAARAREAAR+AR++TRRKGALD+AGLPGKLADCQE+DPALSE+
Sbjct: 371 LQENPNEAKAITGKIVDAARAREAARKARDLTRRKGALDIAGLPGKLADCQEKDPALSEL 430

Query: 421 YLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLASQEVATLITALGCGIGR 480
           ++VEGDSAGGSAKQGRNRKNQA+LPL+GKILNVE+ARFD+MLAS +V TLITALG GIGR
Sbjct: 431 FIVEGDSAGGSAKQGRNRKNQAVLPLRGKILNVERARFDRMLASDQVGTLITALGTGIGR 490

Query: 481 DEYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPEIIERGHVYIAQPPLYKVKKG 540
           DEYNPDKLRYH II+MTDADVDGSHIRTLLLTFFYRQMPE+IERG++YI  PPLYK+K+G
Sbjct: 491 DEYNPDKLRYHRIILMTDADVDGSHIRTLLLTFFYRQMPELIERGYIYIGLPPLYKLKQG 550

Query: 541 KQEQYIKDDEAMDQYQIAIALDGATLHTNASAPALGGEPLETLVSDFNSTQKMIKRMERR 600
           K E Y+KDD A++ Y  + A++GA L   +  P + GE LE L+  F   ++ I R   R
Sbjct: 551 KSELYLKDDAALNAYLASSAVEGAALIPASDEPPITGEALEKLLLLFAGAKEAIARNAHR 610

Query: 601 YPMAMLRAMIYHDTLS--DLSNEAEVTTWLNGLVSYLTEREAHGSTYLAQVRENRETNLF 658
           Y  A+L A+I    L    L  E +V   L+ L + L       + Y  +  +    +  
Sbjct: 611 YDPALLTALIDLPPLDVVQLQAEGDVHPTLDALQAVLNRGTLGTARYHLRF-DPATDSAA 669

Query: 659 EPVLRVRTH-GVDTDYPLEADFIQGPEYRKICALGSQLRGLLEEDAYIERGERRQPVASF 717
             ++ VR H G +    L     +  E R +  +   L GL+ E A I RG +  P+ SF
Sbjct: 670 ASLVSVRKHMGEEFTQVLPMGAFESGELRPLREVALALHGLVREGAQILRGNKSHPITSF 729

Query: 718 EQAIEWLVKESRRGLSVQRYKGLGEMNPDQLWETTMDPDSRRMLRVTIKDAIGADQLFTT 777
            QA  WL++E++RG  VQR+KGLGEMN +QLWETT++PD+RR+L+V I+DA+ ADQ+F+T
Sbjct: 730 AQAQAWLLEEAKRGRQVQRFKGLGEMNAEQLWETTVNPDTRRLLQVRIEDAVAADQIFST 789

Query: 778 LMGDAVEPRRAFIEENALKAANIDI 802
           LMGD VEPRR FIE+NALK +N+DI
Sbjct: 790 LMGDVVEPRRDFIEDNALKVSNLDI 814