Pairwise Alignments

Query, 120 a.a., hypothetical Na+/H+ antiporte (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 501 a.a., Na+/H+ antiporter NhaC (RefSeq) from Shewanella sp. ANA-3

 Score = 68.2 bits (165), Expect = 1e-16
 Identities = 37/106 (34%), Positives = 61/106 (57%)

Query: 11  LSLLPPVVAIVLAIVTRRVLFSLDLGIVIGVLLLYQFLALASAEFLFNNVKRLFGSEAGV 70
           L++LP ++ +VLA+  RR L +L +GI+ G L++ QF  L S  +L     + F S+   
Sbjct: 6   LAILPLLLTLVLALWLRRTLVALGVGILSGALIIAQFDILQSLGYLLEIGAKQFYSQDAW 65

Query: 71  NSWNLYILGFLIVLGMITALITVSGSARAFADWARLHIRNKRDAKL 116
             W+L +L  +++LG +T L+  SG+   F DW    IR  R A++
Sbjct: 66  QWWHLNVLMAMLLLGSMTQLLARSGAVEQFGDWLYRRIRTGRQARI 111