Pairwise Alignments

Query, 161 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 434 a.a., paraquat-inducible protein A from Vibrio cholerae E7946 ATCC 55056

 Score = 60.5 bits (145), Expect = 4e-14
 Identities = 39/156 (25%), Positives = 79/156 (50%), Gaps = 9/156 (5%)

Query: 3   ALCITALVFYFPANFFPVLEIHFLGSIRTTTVFQGAFAVFDQGYWVVGIAVLAAAVVGPG 62
           AL + A++FY PAN +P++    LG    +++ QG   ++  G + V + +  A++  P 
Sbjct: 271 ALLLAAIIFYIPANLYPMMYTVSLGKSEGSSIMQGVILLWHLGSYPVAMVIFLASIFIP- 329

Query: 63  LLILSILIQLLIVKW---GLDSPLGRHSLKQLLKFQ--GLLSQLTMLEIYVISFLVSSFQ 117
              ++ +  L  + W    L+    + +LK+L  ++    + + +M++I+V++ LVS  Q
Sbjct: 330 ---MAKMFALGWLYWQAGKLNVFPEQQNLKRLKVYRVTEFIGRWSMIDIFVVAILVSLVQ 386

Query: 118 LSDFSDIYFGMGTFCFTMLFLVTLFLQREYDIEHMW 153
           L +   IY G     F  + L+T+     +D   +W
Sbjct: 387 LHNLMAIYPGPAALSFAAVVLLTMLSAMVFDSRILW 422



 Score = 33.5 bits (75), Expect = 5e-06
 Identities = 32/152 (21%), Positives = 62/152 (40%), Gaps = 6/152 (3%)

Query: 2   LALCITALVFYFPANFFPVLEIHFLGSIRTTTVFQGAFAVFDQGYWVVGIAVLAAAVVGP 61
           +AL I+ L+    +  FP +     G  +  T+   A  + +    ++ I +    ++ P
Sbjct: 52  VALTISCLILLVLSLTFPFMSFSVQGMTQEITLLNAAKMLGEFQNVLLAILLFTTVILFP 111

Query: 62  GLLILSILIQLLIVKWGLDSPLGRHSL---KQLLKFQGLLSQLTMLEIYVISFLVSSFQL 118
            L I  +L             L    +   K L K    +    M+++++I  LVS  ++
Sbjct: 112 ALYITILLFVSFKAAQSTQRQLSSSEIQRAKLLCKTLLTVQPWLMVDVFLIGVLVSLIKI 171

Query: 119 SDFSDIYFGMG--TFC-FTMLFLVTLFLQREY 147
           +  +++  G     FC F ML + T+ L   Y
Sbjct: 172 ASLAEVAMGYSFWAFCFFAMLVVKTVSLVDRY 203