Pairwise Alignments

Query, 673 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 798 a.a., GGDEF domain-containing protein from Pseudomonas fluorescens SBW25-INTG

 Score = 75.1 bits (183), Expect = 1e-17
 Identities = 86/338 (25%), Positives = 147/338 (43%), Gaps = 23/338 (6%)

Query: 168 LLVGFLLCIGIYYYADMNQRQQLQDKFQIQSNAIISSVESFQGTNLQQLVALASLFDNSE 227
           LL GF L   + + A    +QQ++ +FQ+  N   + ++       Q+L +L   F NS+
Sbjct: 28  LLAGFTLTAIVAWAASDLYQQQVRQRFQLLVNERYTRLQERFEDQEQRLNSLRRFFVNSD 87

Query: 228 KVSENEFIQFGIRNQLQLDGFRAWAWSPLVTLSDKNSFESATRDELGGAFNIKYLQDG-- 285
           +VS  EF  F +   L+    RA++W+P V    +  FE    D+ G  F I+ L     
Sbjct: 88  EVSREEFDGFALPLLLRA---RAYSWAPRVYREQREQFEQTVSDQRGTPFVIRELNSAGE 144

Query: 286 ---KPNADGWLAPVKYVQPLNSSRSVLGLDLNSEPVRAAAIAKVRATLAPVMTSKIQL-A 341
               P  D ++ PV Y Q  +   + LG DL ++PVR +A+ + + T    ++  +QL  
Sbjct: 145 LAPAPERDEYV-PVLYSQTQSLLGAPLGFDLLAQPVRRSALERAQKTGKLAVSQPMQLVG 203

Query: 342 EDPNGPGGALLLVP------SFDRVGNIKGFCSAVIDIESIINKVEQVKGLHWRLTDMSA 395
            +P    G LL+ P      S        G+  AVI +  ++       GL     D   
Sbjct: 204 VEPAYSTGVLLVAPVSRLPTSEQSQNEPYGYVMAVISMRQLV-----ADGLPKPDRDNLT 258

Query: 396 DGALLYANSQKKFPSFSGKLHSDKSGQYYQAHLMLADRHWHIVIYESYAALMGETFSLSL 455
              +  ++ QK+    SG + SD S       L L D  + + +  S         SLS 
Sbjct: 259 MQIVDTSDLQKRVLFESGTVVSD-SDLVGARRLTLGDHVYALSLRPSQVFDQANHSSLST 317

Query: 456 LLLLLAFITCAVVSGMTLISSGERYRIADKVAEKTMAL 493
           +L +   ++  ++S +  +   +R R    V ++T+ L
Sbjct: 318 VLTMGGLLS-LLLSALLYMLVSQRQRALKLVEQRTVQL 354