Pairwise Alignments

Query, 456 a.a., site-specific recombinase, phage integrase family (NCBI) from Shewanella oneidensis MR-1

Subject, 293 a.a., recombinase XerD from Azospirillum brasilense Sp245

 Score = 63.2 bits (152), Expect = 1e-14
 Identities = 58/225 (25%), Positives = 102/225 (45%), Gaps = 25/225 (11%)

Query: 161 RNLDTLQSVFKLALRQGHCLTNPCIGIRQNKR-RVLNRFLSVAEMQRLSVALDECEAVGG 219
           R L  ++  ++  + +G    +P   +   K+ R L + L+V E+ R+   +D  +  GG
Sbjct: 55  RRLSAMRQFYRFLVSEGRRADDPASALDSPKQGRPLPKILTVEEVTRM---IDSAQTRGG 111

Query: 220 SIA-QCADVLRLLLLTGCRLSEITFL---------KGEYVRGN---ELHLPDSKTGAKVL 266
               +   +L +L  TG R+SE+  L         +G  VRG    E  +P S+  +  L
Sbjct: 112 PEGLRLVALLEVLYATGLRVSELVGLPMAAILRDGRGLIVRGKGGKERMVPLSEPASAAL 171

Query: 267 --YIGQAAVDILSRYHCKANTELFPMKQGASTSLVQSLWLRLRKQIGVED------VRLH 318
             Y+   +  IL+         LFP +   +  L +  + +L K++ +E       V  H
Sbjct: 172 NVYLPWRSHFILAGRENGPVAFLFPSRSSTNGHLTRQRFAQLLKELAIESNIDPEKVSPH 231

Query: 319 DLRHTFASYAVMDGCSIPMVASLLGHKKVTMTLRYTHVGDDSVEQ 363
            LRH FA++ +  G  +  V  +LGH  +  T  YTHV  + ++Q
Sbjct: 232 VLRHAFATHLLDRGADLRSVQKMLGHADIATTQIYTHVVSERLKQ 276