Pairwise Alignments

Query, 456 a.a., site-specific recombinase, phage integrase family (NCBI) from Shewanella oneidensis MR-1

Subject, 306 a.a., recombinase XerD from Cupriavidus basilensis FW507-4G11

 Score = 64.7 bits (156), Expect = 4e-15
 Identities = 58/227 (25%), Positives = 104/227 (45%), Gaps = 21/227 (9%)

Query: 154 TRKGAANRNLDTLQSVFKLALRQGHCLTNPCIGIRQNKRRV-LNRFLSVAEMQRLSVALD 212
           TR  +ANR L   +  F+ ALR+     +PC+ +R  K+     + L+ A+++ L    D
Sbjct: 75  TRASSANRRLTVFKRFFQWALREHMITADPCLLLRPAKQPPRFPKTLTEAQVEALLETPD 134

Query: 213 ECEAVGGSIAQCADVLRLLLLTGCRLSEITFLKGEYVRGNE---LHLPDSKTGAKVLYIG 269
               +G    +   +L L+  +G R+SE+T +K   +  NE     +       +++  G
Sbjct: 135 TATPLG---LRDRTMLELMYASGLRVSELTQMKTIEISLNEGVARVVGGKGNKERLVPFG 191

Query: 270 QAAVDILSRYHC---------KANTELFPMKQGASTSLVQSLWLRLRKQIGVEDVRL--- 317
             A D L RY           +A   LF  ++G   +  Q+ W  +++     ++     
Sbjct: 192 TEAGDWLRRYLAEGRPALLGERACEALFVTQRGEGMTR-QAFWHLIKRHAREAEIYAPLS 250

Query: 318 -HDLRHTFASYAVMDGCSIPMVASLLGHKKVTMTLRYTHVGDDSVEQ 363
            H LRH FA++ +  G  + +V  LLGH  ++ T  YTHV  + + +
Sbjct: 251 PHTLRHAFATHLLNHGADLRVVQLLLGHADISTTQIYTHVARERLRE 297