Pairwise Alignments

Query, 456 a.a., site-specific recombinase, phage integrase family (NCBI) from Shewanella oneidensis MR-1

Subject, 311 a.a., tyrosine recombinase XerD from Burkholderia phytofirmans PsJN

 Score = 64.3 bits (155), Expect = 5e-15
 Identities = 76/297 (25%), Positives = 126/297 (42%), Gaps = 35/297 (11%)

Query: 89  MSASPRFDVFVEQTWKPMIFEHWKPSTKRSVLPALNRRL------LAHFGRYPLHMINHK 142
           +++S   D F +  W     EH      R+ L A  R L      LA      L   +  
Sbjct: 17  VASSASIDAFCDALW----LEH---GLSRNTLDAYRRDLRLFCEWLAQSRNASLDTASEA 69

Query: 143 MVQAWFDEISKTRKGAANRNLDTLQSVFKLALRQGHCLTNPCIGIRQNKRRVLNRF---L 199
            + A+     K +  +ANR L   +  +  A+R+     +P + IR  K+    RF   L
Sbjct: 70  DLNAYSAARRKDKSTSANRRLSVFRRYYGWAVREHRTKVDPTVRIRSAKQPP--RFPSTL 127

Query: 200 SVAEMQRLSVALDECEAVGGSIAQCADVLRLLLLTGCRLSEITFLKGEYVRGNELHLPDS 259
           S A+++ L  A D   A+G    +   +L L+  +G R++E+  LK   V  NE  +   
Sbjct: 128 SEAQVEALLGAPDINTALG---LRDRTMLELMYASGLRVTELVTLKTVEVGLNEGVVRVM 184

Query: 260 KTGAK--VLYIGQAAVDILSRYHCKAN--------TELFPMKQGASTSLVQSLWLRLRKQ 309
             G+K  ++  G+ A   + RY  +A         T+   +   A     Q  W  +++ 
Sbjct: 185 GKGSKERLIPFGEEAHSWIERYLREARPALLGARATDALFVTNRAEGMTRQQFWNIIKRH 244

Query: 310 IGVEDVRL----HDLRHTFASYAVMDGCSIPMVASLLGHKKVTMTLRYTHVGDDSVE 362
             V  V      H LRH FA++ +  G  + +V  LLGH  ++ T  YTHV  + ++
Sbjct: 245 AVVAGVHAPLSPHTLRHAFATHLLNHGADLRVVQLLLGHTDISTTQIYTHVARERLK 301