Pairwise Alignments

Query, 376 a.a., site-specific recombinase, phage integrase family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 327 a.a., phage integrase family protein from Marinobacter adhaerens HP15

 Score = 53.5 bits (127), Expect = 8e-12
 Identities = 45/193 (23%), Positives = 95/193 (49%), Gaps = 24/193 (12%)

Query: 181 NPCKGFKRYKSTHSE-RYLSEEELKRLWLALDSHEKASPVAVMVLRLLILTGCRCNEVCS 239
           NP +  +  +    E  +L+ E+++ L   ++   + +P   ++ R+ + TG R  E  +
Sbjct: 147 NPIRNVEMIRLDERELSWLTVEQIRHLLKTIEDFSQ-NPHVHLLTRICLATGARWGEAEN 205

Query: 240 VKWADYRQGHWYLPDSKTG-AKTVFLSSFARELLSDWPQVSEHLFWHQSPSQPFTPACLD 298
           ++    ++G     ++K+G +++V +S   +EL  +   + +HL  H          C  
Sbjct: 206 LQLRHVQEGKLTFVNTKSGKSRSVPVS---KELFEE---IRKHLKEH---------GCFS 250

Query: 299 RFWRPFRETIHLNDVRI------HDLRHTYASIAVKHNINILTIGRLLGHALPETTLKYT 352
                FR  +  + + +      H LRHT+AS  + +  +I+T+ ++LGH+    TL+Y+
Sbjct: 251 FSLSAFRRALDKSGITLPPGQAAHVLRHTFASHFLMNGGDIVTLQKILGHSHISMTLRYS 310

Query: 353 HLAKRDVQQAANV 365
           HLA   + +AA +
Sbjct: 311 HLAPEHLSKAATL 323