Pairwise Alignments

Query, 292 a.a., ParB family protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 296 a.a., putative chromosome partitioning protein parB (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  189 bits (480), Expect = 6e-53
 Identities = 113/297 (38%), Positives = 177/297 (59%), Gaps = 21/297 (7%)

Query: 2   TLKKRGLGKGLDALLSHSHAANKKQTEEVAVVEKKEELIHLDLDLLQPGKYQPRKDMSPE 61
           T K+  LG+GLDALLS                E    +  ++L  +     QPR++    
Sbjct: 3   TQKRNALGRGLDALLSMDDVKT----------EGSSSISEIELAKITVNPNQPRREFDQT 52

Query: 62  ALEELAHSIRNQGIIQPIVVRPVSETQYEIIAGERRWRASQLAGVDKIPCIVKPVPDEAA 121
           AL+ELA SI   GIIQPI +R +S+ +Y+IIAGERR+RASQ AG+  IP  ++   DE  
Sbjct: 53  ALQELADSIAEIGIIQPITLRKLSDDEYQIIAGERRYRASQKAGLKTIPAYIRTADDENM 112

Query: 122 VAIALIENIQREDLNAMEEAIALQRLMQEFELTHQQVADVVGKSRASVSNLLRLNGLNEP 181
           + +ALIENIQREDLNA+E A+A Q L+ ++ELT +++++ +GK+R +++N LRL  L  P
Sbjct: 113 MEMALIENIQREDLNAVEIALAYQHLLDQYELTQERLSERIGKNRTTIANYLRLLKLPAP 172

Query: 182 VKRLLEYGDIDMGHARALLAI-EGEEQTNLARLVAAKELTVRETERLINQTLNPPKPVET 240
           ++  L+   +DMGHARAL+++ + + Q  +   +     +VR+ E ++ ++L+  + V++
Sbjct: 173 IQMALQNKQLDMGHARALISLGDPKLQVKIFEEIQEHGYSVRKVEEIV-KSLSEGEAVKS 231

Query: 241 TTK---------DQDVCRLEQQLIERLGAKVSIAHSSKGKGKIVINYQNLAELDGIL 288
            T+          ++   L+QQL      KV +  S KGKGKI I + N  EL+ I+
Sbjct: 232 GTRKITPKRSKLPEEFNLLKQQLTGFFNTKVQLTCSEKGKGKISIPFSNEEELERIM 288