Pairwise Alignments

Query, 513 a.a., ATP synthase F1, alpha subunit (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 516 a.a., F0F1 ATP synthase subunit alpha from Dyella japonica UNC79MFTsu3.2

 Score =  780 bits (2013), Expect = 0.0
 Identities = 397/511 (77%), Positives = 455/511 (89%)

Query: 3   LNSTEISDLIKQRIEQFEVVSESRNEGTIVAVSDGIIRIHGLADVMQGEMIELPGSRFAI 62
           LN +EIS+LIK RIEQF++ +E+RNEGTI++VSDGI+RIHGLADVMQGEMIELPG+ FA+
Sbjct: 6   LNPSEISELIKTRIEQFKLGAEARNEGTIISVSDGIVRIHGLADVMQGEMIELPGNAFAL 65

Query: 63  ALNLERDSVGAVVMGPYADLAEGVKVKTTGRILEVPVGRGLLGRVVNTLGEPIDGKGAID 122
           ALNLERDSVGAVV+G Y  L EG   KTTGRILEVPVG  LLGRVV++LG PIDGKG ++
Sbjct: 66  ALNLERDSVGAVVLGEYQHLREGDTAKTTGRILEVPVGPELLGRVVDSLGAPIDGKGPLN 125

Query: 123 NDGFSPVEVIAPGVIERKSVDQPVQTGYKAVDAMIPIGRGQRELIIGDRQTGKTAMAIDA 182
               SP+E +APGVI RKSVDQPVQTGYK+VD+MIPIGRGQRELIIGDRQTGKTA+AIDA
Sbjct: 126 AKLSSPIEKVAPGVIWRKSVDQPVQTGYKSVDSMIPIGRGQRELIIGDRQTGKTALAIDA 185

Query: 183 IINQRDSGIKCVYVAVGQKASTIANVVRKLEEHGALANTIVVVATASEAAALQYLAPYSG 242
           IINQ+DSGIKC+YVA+GQK S+IANVVRKLEE+GALANTIVVVA+ASE+AALQY+APY+G
Sbjct: 186 IINQKDSGIKCIYVAIGQKRSSIANVVRKLEENGALANTIVVVASASESAALQYIAPYAG 245

Query: 243 CAMGEYFRDRGEDALIVYDDLSKQAVAYRQISLLLKRPPGREAYPGDVFYLHSRLLERAS 302
           CAMGEYFRDRGEDALI+YDDLSKQAVAYRQISLLLKRPPGREAYPGDVFYLHSRLLERA+
Sbjct: 246 CAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLLLKRPPGREAYPGDVFYLHSRLLERAA 305

Query: 303 RVNEEYVEKFTKGAVTGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETDLFNS 362
           RV+EEYVEKFT G V GKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETDLFN+
Sbjct: 306 RVSEEYVEKFTNGEVKGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLETDLFNA 365

Query: 363 GLRPAVNPGISVSRVGGAAQTKIIKKLSGGIRTALAQYRELAAFSQFASDLDDATRAQLE 422
           G+RPAVN GISVSRVGG+AQTKI+KKLSGG++ ALAQ+RELAAF+QFASDLD ATRAQL+
Sbjct: 366 GIRPAVNAGISVSRVGGSAQTKIVKKLSGGVKLALAQFRELAAFAQFASDLDPATRAQLD 425

Query: 423 HGVRVTELMKQKQYAPMSVAAQAVSIFAAEKGYLKGVELKKVGDFEAALLSYMNSEHAAL 482
            G RVTELMKQKQYAP+S+A  A+S++AAEKGYL  + + KV  FE  L ++ +     L
Sbjct: 426 RGQRVTELMKQKQYAPLSIAELALSVYAAEKGYLDDLAVDKVLPFEKGLHAFFHQNQGEL 485

Query: 483 IKLINETGDYNADIEAELKAGLDKFVATQTW 513
           +K I  TGD+N DIEA  K+GLD++  T +W
Sbjct: 486 MKKIVATGDWNNDIEATFKSGLDEYKKTGSW 516