Pairwise Alignments

Query, 690 a.a., TonB-dependent receptor, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 704 a.a., TonB-denpendent receptor from Herbaspirillum seropedicae SmR1

 Score =  214 bits (544), Expect = 1e-59
 Identities = 190/714 (26%), Positives = 313/714 (43%), Gaps = 67/714 (9%)

Query: 3   MPVMAEAPNDANIERINVTGRTFND-YKVGSASGAMRGDIDLMDTPQSVNVIPDFVTDEQ 61
           +P  A+    A +  I V+G   ND Y   +A    + +  L D PQ++NV+P  V  +Q
Sbjct: 24  LPACAQQDTTA-LPAIEVSGARANDGYVAPTAVSGTKSEAPLRDVPQTINVVPAQVIRDQ 82

Query: 62  LATNLAEVLVNDSSVTAGTTRWNRQVFSIRGFELDSGNGYLINGHQQWSHYVQPIETLQQ 121
            A++L +VL N   +   T    R    IRGF         ++G +  + Y + +  ++ 
Sbjct: 83  NASSLQDVLKNVPGLGLSTGDGQRDQVFIRGFTAIGDQ--FVDGFRDDALYFRDLSNVES 140

Query: 122 VEVLKGPSSMLYGQSGPGGLVNMVTKKPTYDSMLDLGFDTDGYGSTRAQLDAGGSLNEAQ 181
           VEV+KGP+++LYG+   GGL+N VTKKP  D + D+ F  +     RA+LD G +   A 
Sbjct: 141 VEVIKGPAAVLYGRGSSGGLINRVTKKPGVD-VSDVSFTANSTAGRRAELDLGRAGEGAL 199

Query: 182 SIRYRGVLVKQDTKYWREYSTTDENQERDRWLGYLNLEFDISDDLLLSVKYDHTQDKAGI 241
           S R  G + + D+   +++         DR     ++    S D  L ++ D+ +D+  +
Sbjct: 200 SWRLTGAVERGDSFRAQQFI--------DRTAIAPSVALRFSADTKLLLQMDYLEDRRMM 251

Query: 242 DAGGWLDKQGNVIGERKTVWDAPWA----FTDNTVSNLGADLTWQMTNDWKVKVG--YND 295
           D G    +   V  +  T + A  A    F  + V++  A  T +  +++  + G  Y D
Sbjct: 252 DFGIPSYRGRPVDVDPGTTYGARNARDADFVQSRVASTTATFTHRFNDEFSFRNGLRYYD 311

Query: 296 QQFNRQRLDSAPSLIEGSEDPFKDGYNIKPFDRYDD-WQHKTAYVDFTGEFSLAGMEHQF 354
              NR   +        +E       N     R ++ W +++   + T +  L  + H+ 
Sbjct: 312 YHLNRNNTNGGTV----NEATATTTLNHAKLVRDENGWFNQS---ELTQKLQLGSIRHEI 364

Query: 355 LIGANYLDYFYQQQIQKGKSQRVI--PGQPIIQQDLDYHQGQLSNPSEYKY-----YGFY 407
           L G         Q     ++  V+  PG  I    L        NP    Y     +  Y
Sbjct: 365 LYGLE----LGSQSKDASQASGVVNFPGVSIFNPVLPVVDPNRLNPPTLTYGTYDTFATY 420

Query: 408 LQDLMTLNEQWKLLAGVRYDEQKKDT-----AGGNSY-------AVSPKFGVIYSPMDNG 455
           LQD ++L+EQWK L G+RYD  ++ +     A G++        AVSP+ G+++ P    
Sbjct: 421 LQDSLSLSEQWKALVGLRYDRYRQQSRILNLANGSTADLQRTDTAVSPRAGLVWQPSLTQ 480

Query: 456 SIYVNYSKSFTPQGSVTSSEDVNQGANLKPEYGTQYELGTKWELFNDSLLLTAALFDITV 515
           S Y+++S+SF P G   S       A+L PE     E G K++ +      T ++F +  
Sbjct: 481 SYYLSWSRSFQPSGE--SFALATNNADLAPEQTRNTEAGAKYDFWEGRASATVSVFRLER 538

Query: 516 SNVTTVLDIPVTSDGDKTITTQGGEQHHRGFEVGAQGQLGDSWFVTSSMMYLDAEYNTGA 575
            N+ + L           +    G+Q   G E+     L   W + +   +L+A     +
Sbjct: 539 DNIKSALP--------NGVVIPVGKQRTDGAELSFSADLKQGWKLLAGYAWLNAVITESS 590

Query: 576 GKIGGKNLDGKTPIDAPKWSANIWTRYEVTDNFAMNFGAIYVGERFANDVNTITKDGYVR 635
               G    GK     P+ S N+W   E+ +   +  GA  VG RFAN  NT+T  GYV 
Sbjct: 591 SFDNGVPFKGKNATLTPRHSGNLWLTRELGEGLVVGGGANAVGARFANPGNTVTLPGYVT 650

Query: 636 FDVGAAYTTDIMGKDVSIRANVRNLFDTEYL---DGGSDKMVTIGQDRNFSVAL 686
            D  AAY T        ++ N+ NLF+T Y+    G +  +   G  RN ++ L
Sbjct: 651 VDAMAAYRT----SKYEVQLNIGNLFNTGYIISGHGTNPNLSMPGAPRNVALTL 700