Pairwise Alignments

Query, 690 a.a., TonB-dependent receptor, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 706 a.a., TonB-dependent siderophore receptor from Ralstonia sp. UNC404CL21Col

 Score =  219 bits (557), Expect = 5e-61
 Identities = 189/676 (27%), Positives = 316/676 (46%), Gaps = 75/676 (11%)

Query: 23  RTFNDYKVGSASGAMRGDIDLMDTPQSVNVIPDFVTDEQLATNLAEVLVNDSSVTAGTTR 82
           R+   Y    A+ A +  + L + PQSVNV+P  V  +Q A ++ + L N   V+A    
Sbjct: 45  RSSTSYDTPIANTATKIPVPLREIPQSVNVVPRAVIQDQGALSINDTLRNVPGVSASLGD 104

Query: 83  WNRQVFSIRGFELDSGNGYLINGHQQWSHYVQPIETLQQVEVLKGPSSMLYGQSGPGGLV 142
             R   +IRGF   S N   ++G +  S Y + +  + ++EVLKGP+++LYG+   GG++
Sbjct: 105 AQRDQVTIRGFS--SINDQYVDGLRDDSLYFRDLSNIDRIEVLKGPAAVLYGRGSSGGII 162

Query: 143 NMVTKKPTYDSMLDLGFDTDGYGSTRAQLDAGGSLNEAQSIRYRGVLVKQDTKYWREYST 202
           N VTKKP    + ++G         RA+ D   S+N+  +IR R     +D+  +R    
Sbjct: 163 NRVTKKPLATPLAEVGVVVGTERQKRAEFDLNTSIND-DAIRARITGAVEDSGGFRNDYF 221

Query: 203 TDENQERDRWLGYLNLEFDISDDLLLSVKYDHTQDKAGIDAG--GWLDKQGNV-IGERKT 259
                    +L      F+++ D  L+V++D+  DK   D G   +  +  NV I  R  
Sbjct: 222 LRRQAISPSFL------FNLAPDTKLTVQFDYLHDKRIADQGVPSYRGRPVNVPIETRYG 275

Query: 260 VWDAPWAFTDNTVSNLGADLTWQMTNDWKVKVGYNDQQFN--RQRLDSAPSLIEGSEDPF 317
             DA     ++TV ++   L  +  + W       + +++  R    +   + +G     
Sbjct: 276 SADAGAGNVESTVKSVTGTLDHRFNDKWSFHSVVRNYEYSLGRNNYTTVSRVTDGPIPTV 335

Query: 318 KDGYNIKPF-DRYDDWQHKTAYVDFTGEFSLAGMEHQFLIGANYLDYFYQQQIQKGKSQR 376
               N +   DR   WQ+     + T +    G++H  L G   ++  YQ      KS R
Sbjct: 336 TLAVNQRNRNDRGTLWQN-----ELTQKAETWGIQHTLLYG---IELGYQD-----KSDR 382

Query: 377 VI--PGQPIIQ------QDLDYHQGQLSNPSEY-----KYYGFYLQDLMTLNEQWKLLAG 423
           V   PG           Q L    G  + P+ Y     + Y  Y+QDL+  + QW +LAG
Sbjct: 383 VAAAPGSTTYNLFNPTLQVLPTVPGN-AVPTNYGLSHNETYAAYVQDLIKFSPQWTVLAG 441

Query: 424 VRYD---EQKKDTAGGN------SYAVSPKFGVIYSPMDNGSIYVNYSKSFTPQGSVTSS 474
           +RY+   + + D    N         VSP+FGV+Y P++  S+Y +YS+SF P    + +
Sbjct: 442 LRYEILKQSRDDLTPRNVDLSRTDKPVSPRFGVVYHPIEPLSLYASYSRSFQPLAD-SFT 500

Query: 475 EDVNQGANLKPEYGTQYELGTKWELFNDSLLLTAALFDITVSNVT-----TVLDIPVTSD 529
              N GA L P+  T YE+G K++L +    +TAALFD+  +N+T     T+L +P+   
Sbjct: 501 FFPNSGA-LAPQSTTNYEIGAKYDL-SAGASVTAALFDMKQTNLTAADPVTLLGVPI--- 555

Query: 530 GDKTITTQGGEQHHRGFEVGAQGQLGDSWFVTSSMMYLDAEYNTGAGKIGGKNLDGKTPI 589
                    G Q  RG E+   G++  +W + +S  YL+        + GG  ++G  P 
Sbjct: 556 ---------GTQRTRGLELSFTGEIVKTWSLMASYAYLNGRLENPNDRSGGVAVNGNQPS 606

Query: 590 DAPKWSANIWTRYEVTDNFAMNFGAIYVGERFANDVNTITKDGYVRFDVGAAYTTDIMGK 649
             P+ S ++W ++++ + F +  G      R+A+  N  T  GY+  D+GA Y +    K
Sbjct: 607 LTPRHSGSVWLKHDLPNGFYVAGGVRAEAARYASQYNLTTLPGYMTVDLGAGYRS----K 662

Query: 650 DVSIRANVRNLFDTEY 665
            V +  N++NLF+  Y
Sbjct: 663 HVDVTLNLQNLFNRAY 678