Pairwise Alignments

Query, 690 a.a., TonB-dependent receptor, putative (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 702 a.a., TonB-dependent siderophore receptor (RefSeq) from Shewanella sp. ANA-3

 Score = 1221 bits (3158), Expect = 0.0
 Identities = 595/696 (85%), Positives = 634/696 (91%), Gaps = 16/696 (2%)

Query: 1   MAMPVMAEAPNDANIERINVTGRTFNDYKVGSASGAMRGDIDLMDTPQSVNVIPDFVTDE 60
           MAMPVMAEAPND NIERINVTGRTFNDYKVGSASGAMRGDIDLMDTPQSVNVIPDFVTDE
Sbjct: 17  MAMPVMAEAPNDENIERINVTGRTFNDYKVGSASGAMRGDIDLMDTPQSVNVIPDFVTDE 76

Query: 61  QLATNLAEVLVNDSSVTAGTTRWNRQVFSIRGFELDSGNGYLINGHQQWSHYVQPIETLQ 120
           QLATNLAEVLVNDSSVTAGTTRWNRQVFSIRGFELDSGNGYLINGHQQWSHYVQPIETLQ
Sbjct: 77  QLATNLAEVLVNDSSVTAGTTRWNRQVFSIRGFELDSGNGYLINGHQQWSHYVQPIETLQ 136

Query: 121 QVEVLKGPSSMLYGQSGPGGLVNMVTKKPTYDSMLDLGFDTDGYGSTRAQLDAGGSLNEA 180
           QVEVLKGPSSMLYGQSGPGGLVNMVTKKPTYDSML+LGFDTDGYGSTRAQLDAGGSLNEA
Sbjct: 137 QVEVLKGPSSMLYGQSGPGGLVNMVTKKPTYDSMLNLGFDTDGYGSTRAQLDAGGSLNEA 196

Query: 181 QSIRYRGVLVKQDTKYWREYSTTDENQERDRWLGYLNLEFDISDDLLLSVKYDHTQDKAG 240
           QS+RYRGVLVKQDTKYWREYSTTDENQERDRWLGYLNLEFDISDDLLLS+KYDHTQDK G
Sbjct: 197 QSVRYRGVLVKQDTKYWREYSTTDENQERDRWLGYLNLEFDISDDLLLSLKYDHTQDKTG 256

Query: 241 IDAGGWLDKQGNVIGERKTVWDAPWAFTDNTVSNLGADLTWQMTNDWKVKVGYNDQQFNR 300
           IDAGGWLDKQGNV+G+RKT+WDAPWAFTDNTVSNLGADLTW M +DWKVK+GYNDQQFNR
Sbjct: 257 IDAGGWLDKQGNVVGQRKTIWDAPWAFTDNTVSNLGADLTWHMNDDWKVKLGYNDQQFNR 316

Query: 301 QRLDSAPSLIEGSEDPFKDGYNIKPFDRYDDWQHKTAYVDFTGEFSLAGMEHQFLIGANY 360
           QR DSAP   + +EDPF  GY+I+PFDRYDDWQHKTAYVDFTGEF+LAGMEHQ LIGANY
Sbjct: 317 QRFDSAP---QYNEDPFTSGYSIRPFDRYDDWQHKTAYVDFTGEFALAGMEHQLLIGANY 373

Query: 361 LDYFYQQQIQKGKSQRVIPGQPIIQQDLDYHQGQLSNPSEYKYYGFYLQDLMTLNEQWKL 420
           LDYFYQQQI +G +Q VIPGQP+IQ DLDYH G+   P+EYKYYGFYLQDLMT+NEQWKL
Sbjct: 374 LDYFYQQQIARGAAQTVIPGQPVIQPDLDYHTGKKGTPNEYKYYGFYLQDLMTINEQWKL 433

Query: 421 LAGVRYDEQKKDTAGGNSYAVSPKFGVIYSPMDNGSIYVNYSKSFTPQGSVTSSEDVNQG 480
           LAGVRYDEQKKD  G NSYAVSPKFGVIYSPM NGSIYVNYSKSFTPQG +T   +VN  
Sbjct: 434 LAGVRYDEQKKDGFGENSYAVSPKFGVIYSPMTNGSIYVNYSKSFTPQGGITDPLNVNHD 493

Query: 481 ANLKPEYGTQYELGTKWELFNDSLLLTAALFDITVSNVT-----TVLDIPVTSDGDKT-I 534
            NLKPEYG QYE+GTKWELF+DSLLLTAA+FD+T+ N++     T  D P + DG  T I
Sbjct: 494 TNLKPEYGIQYEVGTKWELFDDSLLLTAAVFDVTLENISINEVLTASD-PRSEDGKYTSI 552

Query: 535 TTQGGEQHHRGFEVGAQGQLGDSWFVTSSMMYLDAEYNTGAGKIGGKNLDGKTPIDAPKW 594
           TTQGGEQ HRGFEVGAQG+LGDSWFVTSSMMYLDAEY TG  +      +GKTPIDAP+W
Sbjct: 553 TTQGGEQKHRGFEVGAQGKLGDSWFVTSSMMYLDAEYQTGDER------EGKTPIDAPEW 606

Query: 595 SANIWTRYEVTDNFAMNFGAIYVGERFANDVNTITKDGYVRFDVGAAYTTDIMGKDVSIR 654
           SANIWTRYEVTDNFAMNFGAIYVGERFA+  NTI+KDGYVRFD+GAAYT DIMGKDVSIR
Sbjct: 607 SANIWTRYEVTDNFAMNFGAIYVGERFADVNNTISKDGYVRFDIGAAYTMDIMGKDVSIR 666

Query: 655 ANVRNLFDTEYLDGGSDKMVTIGQDRNFSVALEAKF 690
           ANVRNLFDT+Y+DGG   MVT+GQDRNFSVALEAKF
Sbjct: 667 ANVRNLFDTDYIDGGQYNMVTLGQDRNFSVALEAKF 702