Pairwise Alignments

Query, 256 a.a., transcriptional regulator, DeoR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 260 a.a., DeoR/GlpR transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  360 bits (925), Expect = e-104
 Identities = 181/253 (71%), Positives = 216/253 (85%), Gaps = 1/253 (0%)

Query: 1   MNKRNTQQRRHSIISILNEQGEVSVDELSLRFETSEVTIRKDLAELEKTGLLLRRYGGAV 60
           M+KRNTQ RRH+I+ ++NEQGEVSV+ LS +FETSEVTIRKDLA LEK G LLRRYGGA+
Sbjct: 5   MSKRNTQLRRHTIVKLVNEQGEVSVEALSSQFETSEVTIRKDLASLEKNGQLLRRYGGAI 64

Query: 61  AIPDEVTQ-QFSAKIAPNKLSIAKAAAQLIKDHNRIIIDSGTTTSGLIAELNQKRGLVVM 119
           A+P EV   + + K++  K+S+AKAAA+LI+DHNRI+IDSG+TT+ LI +LN KRGLVVM
Sbjct: 65  ALPKEVMHDELNEKVSVRKISLAKAAAKLIRDHNRIVIDSGSTTAALIQQLNDKRGLVVM 124

Query: 120 TNALHLANAIHELENEPTLLMTGGTWDPHSESFQGQVAEQVLRSYNFDQLFIGADGIDLA 179
           TN+LH+ANA++ELENEPTLLMTGGTWD HSESFQG+VAE VLRSY+FDQLFIGADGIDL 
Sbjct: 125 TNSLHVANALNELENEPTLLMTGGTWDTHSESFQGKVAESVLRSYDFDQLFIGADGIDLD 184

Query: 180 RGTTTFNELTGLSKVMAEVSREVIVMVDSDKIGKRIPNLELPWSKISVLVTDARIEESAL 239
           RGTTTFNEL GLSKVMAEVSREVIVM++SDK+G++IPNLEL W  I VLVTD  + +   
Sbjct: 185 RGTTTFNELVGLSKVMAEVSREVIVMIESDKVGRKIPNLELSWDNIDVLVTDHELSDEFA 244

Query: 240 KQITEQGVKVILA 252
           KQI    V+VI A
Sbjct: 245 KQIESHQVRVIRA 257