Pairwise Alignments

Query, 256 a.a., transcriptional regulator, DeoR family (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 268 a.a., transcriptional repressor AgaR from Dyella japonica UNC79MFTsu3.2

 Score =  137 bits (344), Expect = 3e-37
 Identities = 88/253 (34%), Positives = 142/253 (56%), Gaps = 9/253 (3%)

Query: 7   QQRRHSIISILNEQGEVSVDELSLRFETSEVTIRKDLAELEKTGLLLRRYGGAVAIPDEV 66
           ++RR  I+  + +QG  +V+EL+ +F TS VTIR DL  L ++  + R +GGA+      
Sbjct: 16  EERRRLIVEYVEKQGRATVEELARQFSTSAVTIRNDLESLARSSAIARSHGGALPATAPS 75

Query: 67  TQQFSAKIA-----PNKLSIAKAAAQLIKDHNRIIIDSGTTTSGLIAELNQKR--GLVVM 119
           +      I        KL I +AAA+LI+D   +I+DSG+TT  +  ++ Q++   L V+
Sbjct: 76  SHDTPLNIKETRHHAQKLRIGQAAARLIEDGETVILDSGSTTVEIARQIRQQKFESLTVI 135

Query: 120 TNALHLANAIHELENEPTLLMTGGTWDPHSESFQGQVAEQVLRSYNFDQLFIGADGIDLA 179
           TNAL++A  +  L +   ++M GG     S S  G  AEQ L   + D+LF+G DG+D  
Sbjct: 136 TNALNIALELSGLAH-IRVMMLGGLLRETSYSLVGPDAEQALAKLSADKLFLGVDGLDPV 194

Query: 180 RGTTTFNEL-TGLSKVMAEVSREVIVMVDSDKIGKRIPNLELPWSKISVLVTDARIEESA 238
            G TT + L   L+ +M  VSRE I + D+ K+G+R  ++  P  ++  ++TD   E  A
Sbjct: 195 VGVTTPDPLEASLNALMIRVSRETIAVFDASKLGQRSLSVITPVQQLHRVITDNSAEPKA 254

Query: 239 LKQITEQGVKVIL 251
           ++ +   GV V+L
Sbjct: 255 VEALRAAGVDVML 267