Pairwise Alignments

Query, 764 a.a., sensory box protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 849 a.a., sensor domain-containing phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

 Score =  152 bits (384), Expect = 7e-41
 Identities = 107/402 (26%), Positives = 202/402 (50%), Gaps = 30/402 (7%)

Query: 364 GALLFVNVDT-HDISDSLSTHELERLLSQLGARLSSYFTENIVVAHIEFGNFAFLVKDLA 422
           G L+ + +D   DI+DSL  H+ ++LL  +  RL   F E  ++A I    FA  + D+ 
Sbjct: 454 GGLILIGIDKFRDINDSLGHHQADQLLVAIAQRLKVTFPEPALIARIGGDEFAIYLPDVN 513

Query: 423 VDAEMAGRRALALATELRQITMRPFHYGEHHFSLVANLGICLLDSVETLAPELVV--RRA 480
              ++      ++AT++ ++   PF     + ++  ++GI  L+      P + V  R  
Sbjct: 514 QQDDLK-----SVATDILKLFASPFSMPSDNIAVNVSIGIVYLEE-----PNMTVWLRNG 563

Query: 481 QLAMEHGKSSEHAGCAFYHPDLARALDPEPSLLNALQRAITDNQLSLMFQPVVDVY-GKI 539
            +A+ + K+ EH   +FY P++A A      ++  ++ A+ + +    +QP+VD+  G++
Sbjct: 564 SIALSNAKA-EHTHISFYSPEMANASRKRMLMVTQIKLALDNQEFVPFYQPIVDLNSGEV 622

Query: 540 ESAEVLSRWSLANGEIVPVAQFISLAEQNGLVASLDLNVTERVCQLVKQFRQLGITLPR- 598
             AE L+RW      ++P   FI +AE++GL+ ++   +  + C    +    GI   + 
Sbjct: 623 LGAEALARWISPEFGLIPPMDFIPIAEESGLINAIGEQILRQACADTVR----GIAENKW 678

Query: 599 -----LTLNISTLSFCQADFIEQFIAVVRSYELDDKQLGVELAESVFLTSKAFVEPRIIQ 653
                + +N+S       DFI Q  +V+    L    L +E+ ES  + +   +   +++
Sbjct: 679 PSTFHMHVNLSVNQLSHPDFIAQLHSVLDESGLQPTNLTLEITESRIVDNDPVILHNMLE 738

Query: 654 LVEAGIAITLDNFGAGQSALSCLHNYPLTEVKLDVHCAVSLLN----DASWNQALIQAVQ 709
           L +A I I +D+FG G S+L+ LH  P   +K+D    VS LN    + S   A++   +
Sbjct: 739 LKKARIHIAIDDFGTGYSSLAYLHKLPFDCLKIDRE-FVSQLNAYNIENSVVAAIVNMTR 797

Query: 710 PFKLPIVAKGVESVQQQQLFTTLGCTHFQGYNIARALSLNDF 751
            FK+ +VA+G+E+ +Q  L   LGC   QG+  ++ ++  D+
Sbjct: 798 GFKVELVAEGIETQEQVDLLNQLGCPRGQGFLFSKPMAYQDW 839