Pairwise Alignments

Query, 764 a.a., sensory box protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 709 a.a., signal transduction protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  225 bits (574), Expect = 5e-63
 Identities = 160/582 (27%), Positives = 281/582 (48%), Gaps = 9/582 (1%)

Query: 176 EVLSLQTSLQQVHERLGRAVKQLNDSEQRWLFAVEGSRNGIWDWDLRTGEVFLSDRWKEM 235
           EVL + T    +   L  A + L  SE+R    ++G+ +  WDWDLR   V+ S RW +M
Sbjct: 113 EVLQVITCFTDI-SALKHAEEALKASEERLNLMLQGANDAAWDWDLRQHTVYYSPRWWQM 171

Query: 236 IGYLPDELEGAFQTWEARLHPDDKQAVLNCLDE-YVSGKTKEFESVHRLLHRDGHYVWVF 294
           IG  PDELE     W   LHPDD Q V++ ++  +       F++  RL  + G Y+ V 
Sbjct: 172 IGREPDELEPTEDLWVKLLHPDDYQKVMDKMNGLFDRSGPSSFDTEFRLQTKSGSYLPVL 231

Query: 295 DRGMLVDWDHLGRPTRMIGIHVDVSESEKNHAAIAELVKQSASGHRMLPEAFMEQLSQYL 354
            RG+++     G P RM G ++D++E +++ A I +L               ME+L   +
Sbjct: 232 CRGVILRGAD-GTPLRMSGTNMDLTERKESEARIYQLAYYDVLTGLANRTLLMERLKAAI 290

Query: 355 SQRNRAGYWGALLFVNVDTHDISDSLSTHEL-ERLLSQLGARLSSYFTENIVVAHIEFGN 413
           +   R+   GALL +++D   I +    H++ + LL  +  RL        +VA +    
Sbjct: 291 ALCERSKQIGALLIIDLDNFKILNDTMGHDVGDALLKMVADRLLQAVRRCELVARLGGDE 350

Query: 414 FAFLVKDLAVDAEMAGRRALALATELRQITMRPFHYGEHHFSLVANLGICLLDSVETLAP 473
           F  ++++L +D   A  +A ++  ++R +   PF           ++GI L         
Sbjct: 351 FVIVMENLGIDERGAALKAKSVGQKVRGLLNDPFMLAGKQLRTSPSIGIALFAEGRPGLE 410

Query: 474 ELVVRRAQLAMEHGKSSEHAGCAFYHPDLARALDPEPSLLNALQRAITDNQLSLMFQPVV 533
           EL +++A +AM   K +      F+ P +  A++   +L N L+  + +N+  L  QP V
Sbjct: 411 EL-LKQADVAMYQAKEAGKNALRFFDPAMQAAVEERVALENDLRNGVLENEFRLFCQPQV 469

Query: 534 DVYGKIESAEVLSRWSLANGEIVPVAQFISLAEQNGLVASLDLNVTERVCQ-LVKQFRQL 592
           D  G++   EVL RW      +V   QFI LAEQ  L+  +   V  + C+ LV+     
Sbjct: 470 DACGRLCGGEVLIRWQHPVRGLVMPNQFIPLAEQTDLIIPIGEWVLRKTCETLVEWESHP 529

Query: 593 GITLPRLTLNISTLSFCQADFIEQFIAVVRSYELDDKQLGVELAESVFLTSKAFVEPRII 652
            +    L++N+S       +F+E+ +A++     +  ++ +EL ES+   +   +  ++ 
Sbjct: 530 SLAQISLSVNVSVNQVRDHNFVERVLAIIDDCGANPARIMLELTESLMAENVEEIILKMN 589

Query: 653 QLVEAGIAITLDNFGAGQSALSCLHNYPLTEVKLDVHCAVSLL---NDASWNQALIQAVQ 709
            L   G+  ++D+FG G S+LS L  +PL+E+K+D      +    +DA   + +I   +
Sbjct: 590 ALRVRGVRFSVDDFGTGYSSLSYLKRFPLSELKIDQSFVREIALNQHDAVITEIIITLAK 649

Query: 710 PFKLPIVAKGVESVQQQQLFTTLGCTHFQGYNIARALSLNDF 751
              L ++A+GVE+  Q        C++FQGY   +  ++  F
Sbjct: 650 KLGLGVLAEGVETEDQLNFLLAHDCSYFQGYLFGKPCAIELF 691