Pairwise Alignments

Query, 764 a.a., sensory box protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 714 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  154 bits (390), Expect = 1e-41
 Identities = 119/450 (26%), Positives = 207/450 (46%), Gaps = 19/450 (4%)

Query: 306 GRPTRMIGIHVDVSESEKNHAAIAELVKQSASGHRMLPEAFMEQLSQYLSQRNRAGYWGA 365
           G     + +  D+SE ++  A I  L    A         F ++ +Q L    R     A
Sbjct: 253 GAVLNYVAMWSDISERKEAEARIHYLAHYDALTDLPNRVLFNDRFTQALIHARRYDQSVA 312

Query: 366 LLFVNVDTHDI-SDSLSTHELERLLSQLGARLSSYFTENIVVAHIEFGNFAFLVKDLAVD 424
           L+FV++D   + +D+L     + LL Q+  RL     E   V+      F  L+ +L + 
Sbjct: 313 LMFVDLDRFKVVNDTLGHRVGDELLKQVAERLRRCVREEDTVSRQGGDEFVVLLANLDMS 372

Query: 425 AEMAGRRALALATELRQITMRPFHYGEHHFSLVANLGICLLDSVETLAPELVVRRAQLAM 484
           A+ A      ++ ++ +    P ++  H  S+  ++GI    S +   P+ +++ A LAM
Sbjct: 373 ADAA-----VVSDKILEALAEPMYFEGHELSVTCSIGIACYPS-DGADPDTLMKNADLAM 426

Query: 485 EHGKSSEHAGCAFYHPDLARALDPEPSLLNALQRAITDNQLSLMFQPVVD-VYGKIESAE 543
              KS       F+ P+L +      +L NA++RA+  ++  L + P VD   G++ S E
Sbjct: 427 YRAKSVGRNNYQFFSPELEQGALTRLTLENAMRRALDRDEFELHYLPQVDNPSGRLLSLE 486

Query: 544 VLSRWSLANGEIVPVAQFISLAEQNGLVASLDLNVTERVCQLVKQFRQLGITLPRLTLNI 603
            L RW      ++  +QFI LAE++GLV  + L V  RV + +  +R+  +TL  + +N+
Sbjct: 487 ALIRWQHPERGLLLPSQFIPLAEESGLVLPISLWVLRRVARQLADWRRQNLTLVPVAINL 546

Query: 604 STLSFCQADFIEQFIAVVRSYELDDKQLGVELAESVFLTSKAFVEPRIIQLVEAGIAITL 663
                 Q DF E    ++    ++ + + +E  E   +         +  L   G+ ITL
Sbjct: 547 CEAQLRQPDFAEALGRILSEEGVEGRWIELEFTEGALMHDTERNLRVLSALKRLGVGITL 606

Query: 664 DNFGAGQSALSCLHNYPLTEVKLDVHCAVSLLNDASWNQ-------ALIQAVQPFKLPIV 716
           D+FG G S L+ L   P+  +K+D     SL+ D + N+       A+I   Q   L +V
Sbjct: 607 DDFGVGYSNLNVLRRLPVDTLKID----RSLVTDVTRNEDDAVIVDAIISMAQSMNLKVV 662

Query: 717 AKGVESVQQQQLFTTLGCTHFQGYNIARAL 746
           A+GVE+  Q   F    C   QG+  ++A+
Sbjct: 663 AEGVETADQAGFFKARACAEIQGHFFSKAI 692