Pairwise Alignments

Query, 764 a.a., sensory box protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 651 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  181 bits (458), Expect = 1e-49
 Identities = 131/456 (28%), Positives = 224/456 (49%), Gaps = 12/456 (2%)

Query: 303 DHLGRPTRMIGIHVDVSESEKNHAAIAELVKQSASGHRMLPEAFMEQLSQYLSQRNRAGY 362
           D   +P   +G+ +D+S   ++   +  L              F+ +L   LS   R G 
Sbjct: 186 DEAHQPVSYVGVFLDLSPIRRSEQKLLHLAHHDPLTDLPNRTLFLARLEHALSLSAREGG 245

Query: 363 WGALLFVNVDTH-DISDSLSTHELERLLSQLGARLSSYFTENIVVAHIEFGNFAFLVKDL 421
            GA+LF+++D   D++DSL     +RLL  +  RL     E+  +A +    F  L++  
Sbjct: 246 SGAVLFLDLDRFKDVNDSLGHPTGDRLLCAVAERLRPCLRESDTLARLGGDEFLLLLETA 305

Query: 422 AVDAEMAGRRALALATELRQITMRPFHYGEHHFSLV-ANLGICLLDSVETLAPELVVRRA 480
           A        RA  +A +L +    PF   +     V A++GICL  +    A  L+ + A
Sbjct: 306 ATP-----ERAAVVAEKLLEQLAAPFRLDDRSEVYVGASIGICLYPADGDNATTLI-QHA 359

Query: 481 QLAMEHGKSSEHAGCAFYHPDLARALDPEPSLLNALQRAITDNQLSLMFQPVVDVY-GKI 539
             A+   K++      FY     R  D   +L  AL+R +   +  L +QP VD+    +
Sbjct: 360 DSALYQAKAAGRHTFRFYSEAQTRQADARLALEAALRRGLEKEEFLLYYQPQVDLRTASL 419

Query: 540 ESAEVLSRWSLANGEIVPVAQFISLAEQNGLVASLDLNVTERVCQLVKQFRQLGITLPRL 599
           E  E L RW L  GE+VP A+FI LAE+ GL+  L   V  + C+ ++Q+   G+ + R+
Sbjct: 420 EGVEALVRWRLPGGELVPPARFIPLAEETGLILPLGEWVLRQACRQMQQWVARGLPIRRV 479

Query: 600 TLNISTLSFCQADFIEQFIAVVRSYELDDKQLGVELAESVFLTSKAFVEPRIIQLVEAGI 659
            +N+S+  F QAD +++  A++    L  + L +E+ ES+ + + A V+ ++  L   GI
Sbjct: 480 AVNLSSRQFRQADLLQRINAILAETGLAPRYLELEITESLLMDNSAQVDAKLEALEAMGI 539

Query: 660 AITLDNFGAGQSALSCLHNYPLTEVKLDVHCAVSLLND---ASWNQALIQAVQPFKLPIV 716
            + +D+FG G S+LS L  +PL  +KLD      + +D   ++   ++I+  Q   + I+
Sbjct: 540 RLAIDDFGTGYSSLSYLKRFPLHTLKLDRSFIRDIADDPVSSNIVASIIELGQHLDMDIL 599

Query: 717 AKGVESVQQQQLFTTLGCTHFQGYNIARALSLNDFK 752
           A+GVE+ QQ+ +    GC   QGY  +  L   + +
Sbjct: 600 AEGVETDQQRGILLQNGCRTCQGYLFSHPLPAEELE 635