Pairwise Alignments

Query, 764 a.a., sensory box protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 972 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  153 bits (387), Expect = 4e-41
 Identities = 121/445 (27%), Positives = 208/445 (46%), Gaps = 15/445 (3%)

Query: 303 DHLGRPTRMIGIHVDVSESEKNHAAIAELVKQSASGHRMLPEAFMEQLSQYLSQRNRAGY 362
           D  G+ ++ +G+  D+++ ++  A I  L              F ++L   L Q +R+  
Sbjct: 509 DGAGQVSQYVGLFTDITDRKQAEAHIHHLAYHDPLTGLPNRRLFYDRLENALRQAHRSRR 568

Query: 363 WGALLFVNVDTHD-ISDSLSTHELERLLSQLGARLSSYFTENIVVAHIEFGNFAFLVKDL 421
             A+L +++D    ++D+L   + + LL ++GARLS    E   +A +    F  L+ ++
Sbjct: 569 KLAVLLLDLDRFKAVNDTLGHDQGDLLLKEVGARLSLCLREGDTLARLGGDEFVLLLPEV 628

Query: 422 --AVDAEMAGRRALALATELRQITMRPFHYGEHHFSLVANLGICLLDSVETLAPELVVRR 479
             A DA +   + LA   +       P   GE       ++GI L  + +    E +++ 
Sbjct: 629 LSAEDASIVAGKLLAQFDQ-------PVRLGEREIFASTSIGIALYPA-DGEDGESLLKH 680

Query: 480 AQLAMEHGKSSEHAGCAFYHPDLARALDPEPSLLNALQRAITDNQLSLMFQPVVDVY-GK 538
           A +AM   K    A   F+             L N L+RA+   QL L +QP +    G+
Sbjct: 681 ADVAMYAAKDGGRAAYRFFIASHNERSLERLELENDLRRAVEGEQLLLYYQPQIGASSGR 740

Query: 539 IESAEVLSRWSLANGEIVPVAQFISLAEQNGLVASLDLNVTERVCQLVKQFRQLGITLPR 598
           I   E L RW      +V    FI+LAE  GL+ ++        C+ ++ +++ G+ +PR
Sbjct: 741 IAGVEALVRWRHPTRGLVMPDSFIALAENAGLIDAIGHWCLVAACRQLRAWQEQGVPVPR 800

Query: 599 LTLNISTLSFCQADFIEQFIAVVRSYELDDKQLGVELAESVFLTSKAFVEPRIIQLVEAG 658
           + +N+S     + DF ++ + VV    +D   L +EL ES        +      L +AG
Sbjct: 801 VAVNVSARQLRRWDFAQEVLQVVTQSGIDPAGLELELTESSLADDPEQILAIFSTLRQAG 860

Query: 659 IAITLDNFGAGQSALSCLHNYPLTEVKLDVHCAVSLLND---ASWNQALIQAVQPFKLPI 715
           + +++D+FG G S+LS L  YP+ EVK+D      LL+D    S  +A+I       +  
Sbjct: 861 VRVSIDDFGTGYSSLSYLSRYPVDEVKIDRSFVSRLLDDREARSVVRAVILLAHGLGMRT 920

Query: 716 VAKGVESVQQQQLFTTLGCTHFQGY 740
           VA+GVE+  Q Q+ + L C   QGY
Sbjct: 921 VAEGVETEAQWQVLSDLDCDELQGY 945