Pairwise Alignments

Query, 764 a.a., sensory box protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 755 a.a., sensory box/GGDEF family protein from Marinobacter adhaerens HP15

 Score =  182 bits (462), Expect = 6e-50
 Identities = 147/542 (27%), Positives = 251/542 (46%), Gaps = 24/542 (4%)

Query: 227 FLSDRWKEMIGYLPDELEGAFQTWEARLHPDDKQAVLNCLDEYVSGKTKEFESVHRLLHR 286
           F+S++ +++ G   D+L    Q     +  +DK + L  +DE     T  FE+  R    
Sbjct: 213 FISEKVEDIFGLSADQLSKDAQPLLNLIKDEDKASFLEKVDESRRCMTP-FETSFRACKS 271

Query: 287 DGHYVWVFDRGMLVDWDHLGRPTRMI-------GIHVDVSESEKNHAAIAELVKQSASGH 339
           DG   WV  R +         P R+        G   DV++ +++ + I +L        
Sbjct: 272 DGTMAWVEARSV---------PARLADDSMTWHGYFFDVTDRKQSESEIEKLAFYDPLTG 322

Query: 340 RMLPEAFMEQLSQYLSQRNRAGYWGALLFVNVDTH-DISDSLSTHELERLLSQLGARLSS 398
                   ++L+Q L+  NR    GAL+F+++D   +I+DS      + LL Q+G RL +
Sbjct: 323 LPNRRLLRDRLAQALTGSNRDHNHGALVFIDLDNFKNINDSAGHLTGDELLVQVGERLKN 382

Query: 399 YFTENIVVAHIEFGNFAFLVKDLAVDAEMAGRRALALATELRQITMRPFHYGEHHFSLVA 458
              +   VA +    F  ++K    +   A  +   +  ++R     P+      ++   
Sbjct: 383 TVRDWDTVARLGGDEFVLILKGFPAEPADAAAKVEKVCEKIRDALNEPYDLNGIEYTGTP 442

Query: 459 NLGICLLDSVETLAPELVVRRAQLAMEHGKSSEHAGCAFYHPDLARALDPEPSLLNALQR 518
           ++GI L    +T   EL+  +A +AM   K        FY   + + +    +L + L+ 
Sbjct: 443 SIGITLFYDHDTSLEELL-SQADMAMFRAKEDGRNCIRFYDCMMQKKVSERLALESDLRV 501

Query: 519 AITDNQLSLMFQPVVDVYGKIESAEVLSRWSLANGEIVPVAQFISLAEQNGLVASLDLNV 578
           A+  NQL++ +Q +V+  G+   AE L RW      +V  A+FI LAE+ GL+ S+   V
Sbjct: 502 ALRKNQLAVHYQVLVNEKGEPVGAEALLRWHCPGRGMVSPAEFIPLAEETGLIESVGYWV 561

Query: 579 TERVCQLVKQFRQLGITLPRL--TLNISTLSFCQADFIEQFIAVVRSYELDDKQLGVELA 636
            E V   +  +++ G  L +L  ++N+S   F    F    +A++R      + L VE+ 
Sbjct: 562 LEDVLSRIASWKERGGPLSKLQVSVNVSARQFHLPSFCSTVMALLRKTGASPRNLKVEIT 621

Query: 637 ESVFLTSKAFVEPRIIQLVEAGIAITLDNFGAGQSALSCLHNYPLTEVKLDVHCAVSLL- 695
           ES        VE  +  L   GI I+LD+FG G S+L  L    L E+K+D      +L 
Sbjct: 622 ESALAYDLELVEETLRTLRSMGIRISLDDFGTGYSSLGYLKRLSLDELKIDQGFVRDILD 681

Query: 696 --NDASWNQALIQAVQPFKLPIVAKGVESVQQQQLFTTLGCTHFQGYNIARALSLNDFKQ 753
             NDA+  + ++      KL  VA+GVE+  Q +    +GCT FQGY+ +R L   +F++
Sbjct: 682 DPNDAAIAETILALASALKLSAVAEGVETKGQLERLVRMGCTRFQGYHFSRPLPALEFER 741

Query: 754 LV 755
           L+
Sbjct: 742 LI 743