Pairwise Alignments

Query, 764 a.a., sensory box protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 1037 a.a., diguanylate phosphodiesterase from Burkholderia phytofirmans PsJN

 Score =  180 bits (457), Expect = 3e-49
 Identities = 128/455 (28%), Positives = 219/455 (48%), Gaps = 7/455 (1%)

Query: 306  GRPTRMIGIHVDVSESEKNHAAIAELVKQSASGHRMLPEAFMEQLSQYLSQRNRAGYWGA 365
            G  +  +G H D++E +     I EL    A          +++L Q ++   R    GA
Sbjct: 572  GTVSHYVGTHHDITERKIAEERIKELAFFDALTRLPNRTLLLDRLRQAITASARNEACGA 631

Query: 366  LLFVNVDTHD-ISDSLSTHELERLLSQLGARLSSYFTENIVVAHIEFGNFAFLVKDLAVD 424
            LLF+++D    ++D+L   + + LL Q+  RL+    E+  VA +    F  ++ +L  +
Sbjct: 632  LLFIDLDHFKTLNDTLGHDKGDLLLQQVARRLADSVLESDTVARVGGDEFVVVLGNLHKN 691

Query: 425  AEMAGRRALALATELRQITMRPFHYGEHHFSLVANLGICLLDSVETLAPELVVRRAQLAM 484
             + A  +  A+   +  +   P+H G+  +   A++G  +    +    EL+ ++A LAM
Sbjct: 692  RQEAANQTEAVGERILAVLGSPYHLGKIEYRTSASIGATVFRGHQASIDELL-KQADLAM 750

Query: 485  EHGKSSEHAGCAFYHPDLARALDPEPSLLNALQRAITDNQLSLMFQPVVDVYGKIESAEV 544
               K        F+ PD+   +    +L   L+ AI DNQ  L +Q  V V  ++  AE 
Sbjct: 751  YKSKERGRNAVRFFDPDMQTVVVQRAALEAGLRNAIEDNQFLLHYQAQV-VGTRVTGAEA 809

Query: 545  LSRWSLANGEIVPVAQFISLAEQNGLVASLDLNVTERVC-QLVKQFRQLGITLPRLTLNI 603
            L RW      IVP A+FI LAE+ GL+ +L   V E  C QL +   +  +    + +N+
Sbjct: 810  LVRWQHPQRGIVPPAEFIPLAEETGLIVALGSWVLEAACAQLARWAARPDMAHLTIAVNV 869

Query: 604  STLSFCQADFIEQFIAVVRSYELDDKQLGVELAESVFLTSKAFVEPRIIQLVEAGIAITL 663
            S   F +ADF++  + ++        +L +EL ESV + +   +  ++  L   GI   L
Sbjct: 870  SVQQFRKADFVDNVLTIIGRTGARPDRLKLELTESVLVDNVQDIIEKMSALKAKGIVFAL 929

Query: 664  DNFGAGQSALSCLHNYPLTEVKLDVHCAVSLL---NDASWNQALIQAVQPFKLPIVAKGV 720
            D+FG G S+LS L   PL ++K+D      +L   NDA   + ++   +   L ++A+GV
Sbjct: 930  DDFGIGYSSLSYLKRLPLDQLKIDRSFVRDVLVDSNDAVIARTIVALARSLGLGVIAEGV 989

Query: 721  ESVQQQQLFTTLGCTHFQGYNIARALSLNDFKQLV 755
            E+  Q+      GC  +QGY   R L + DF+ L+
Sbjct: 990  ETEAQRDFLAAAGCYAYQGYYFCRPLPIEDFEALL 1024