Pairwise Alignments

Query, 764 a.a., sensory box protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 816 a.a., diguanylate phosphodiesterase (RefSeq) from Shewanella sp. ANA-3

 Score = 1276 bits (3302), Expect = 0.0
 Identities = 629/764 (82%), Positives = 691/764 (90%)

Query: 1   MQAIVQSAQALQDIERIEQEVSLATLDMNVMVYILLDANSRIRFANHAVWRDSNAIEVID 60
           MQ IVQSAQALQD+ERIEQEVSLATLDMNVMVYILLDANSRIRFANH VWRDSNAIEVID
Sbjct: 53  MQTIVQSAQALQDVERIEQEVSLATLDMNVMVYILLDANSRIRFANHTVWRDSNAIEVID 112

Query: 61  GYDVIQHHAVVQSGLASISVNPERLSIQAYYPVEAQYPGATELVYLESDLAPLVAKASTE 120
           GYDV++HHAVVQSG AS+S+NP+RLSIQAYYPV+AQYPGATEL+YLESDLAPLVAKASTE
Sbjct: 113 GYDVVRHHAVVQSGQASVSINPDRLSIQAYYPVDAQYPGATELIYLESDLAPLVAKASTE 172

Query: 121 LQQRFMRVWGLGALLLIGFTCVLYYLLIRPFKLLSKSAKHVGTPEFTIQVPWSAAEVLSL 180
           LQQRFMRVWGLGALLLIGFT VLYYLLIRPFK+LS+SAKHVGTPEF+ QVPWSA+EVLSL
Sbjct: 173 LQQRFMRVWGLGALLLIGFTFVLYYLLIRPFKMLSESAKHVGTPEFSTQVPWSASEVLSL 232

Query: 181 QTSLQQVHERLGRAVKQLNDSEQRWLFAVEGSRNGIWDWDLRTGEVFLSDRWKEMIGYLP 240
           QT+LQQVHE LGRAVKQLNDSEQRWLFAVEGSRNGIWDW++R+GEVFLSDRWKEMIGY P
Sbjct: 233 QTTLQQVHEHLGRAVKQLNDSEQRWLFAVEGSRNGIWDWNIRSGEVFLSDRWKEMIGYQP 292

Query: 241 DELEGAFQTWEARLHPDDKQAVLNCLDEYVSGKTKEFESVHRLLHRDGHYVWVFDRGMLV 300
           DELE  FQTWE RLHPDDKQAVL+CL EYVSGKTKEFESVHRL HRDGHYVWVFDRGMLV
Sbjct: 293 DELEEVFQTWETRLHPDDKQAVLDCLQEYVSGKTKEFESVHRLQHRDGHYVWVFDRGMLV 352

Query: 301 DWDHLGRPTRMIGIHVDVSESEKNHAAIAELVKQSASGHRMLPEAFMEQLSQYLSQRNRA 360
           DWDHLGRPTRMIGIHVDVSESE+NHAAIAELVKQS +G +MLPE FM QLSQYL+QR  A
Sbjct: 353 DWDHLGRPTRMIGIHVDVSESERNHAAIAELVKQSVAGPKMLPETFMAQLSQYLNQRTSA 412

Query: 361 GYWGALLFVNVDTHDISDSLSTHELERLLSQLGARLSSYFTENIVVAHIEFGNFAFLVKD 420
           GYWGALL +NV+T   + +L++HELERLLSQL ARLSSYF ENIVVAH+E G FA L K+
Sbjct: 413 GYWGALLLLNVETLGANGTLTSHELERLLSQLSARLSSYFAENIVVAHLELGRFALLAKE 472

Query: 421 LAVDAEMAGRRALALATELRQITMRPFHYGEHHFSLVANLGICLLDSVETLAPELVVRRA 480
           LA DA MAGRRALALATEL+QI  RPFHYGEH F L AN+GICLLDSV+TLA EL VRRA
Sbjct: 473 LAADANMAGRRALALATELKQIATRPFHYGEHDFRLNANIGICLLDSVDTLASELAVRRA 532

Query: 481 QLAMEHGKSSEHAGCAFYHPDLARALDPEPSLLNALQRAITDNQLSLMFQPVVDVYGKIE 540
           +LAM+H +SSEHAGCAFYHPDL R+ DPE SLLN L+RAI +NQLSLMFQPVVD+ GKI 
Sbjct: 533 ELAMQHAQSSEHAGCAFYHPDLERSQDPESSLLNRLERAIAENQLSLMFQPVVDMQGKIV 592

Query: 541 SAEVLSRWSLANGEIVPVAQFISLAEQNGLVASLDLNVTERVCQLVKQFRQLGITLPRLT 600
           SAEVLSRW LA+GEIVPVA+FI LAE++GL+ASLDLNV  RVCQL+KQF+Q GI LPRLT
Sbjct: 593 SAEVLSRWHLADGEIVPVAKFIDLAERHGLIASLDLNVATRVCQLIKQFKQQGINLPRLT 652

Query: 601 LNISTLSFCQADFIEQFIAVVRSYELDDKQLGVELAESVFLTSKAFVEPRIIQLVEAGIA 660
           LNISTLSFCQA+F+EQ +A+ R YELDD QLG+EL ES  LTS +F+ PRI  L EAG+A
Sbjct: 653 LNISTLSFCQAEFVEQLVALTRRYELDDNQLGIELTESALLTSASFILPRISLLAEAGVA 712

Query: 661 ITLDNFGAGQSALSCLHNYPLTEVKLDVHCAVSLLNDASWNQALIQAVQPFKLPIVAKGV 720
           +TLDNFGAGQ ALSCL +YPL EVKLD+HCA +L NDASW+QALIQ+V PF LPIVAKGV
Sbjct: 713 LTLDNFGAGQGALSCLRHYPLREVKLDLHCAANLTNDASWSQALIQSVHPFNLPIVAKGV 772

Query: 721 ESVQQQQLFTTLGCTHFQGYNIARALSLNDFKQLVCPRPLLRSV 764
           ES QQQQLF+ LGCTHFQGYNIARALS+NDFKQLVCPRPLLRSV
Sbjct: 773 ESPQQQQLFSRLGCTHFQGYNIARALSVNDFKQLVCPRPLLRSV 816