Pairwise Alignments

Query, 601 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 605 a.a., FIG01113058: hypothetical protein from Xanthomonas campestris pv. campestris strain 8004

 Score =  503 bits (1294), Expect = e-146
 Identities = 268/600 (44%), Positives = 370/600 (61%), Gaps = 25/600 (4%)

Query: 8   SLLICVLSACSTAKPPAESASQTAVAITQSSVKTMAPA---LQAIVDQSW---QLQLSAS 61
           S  +  LS  + A PP         A   ++++  APA    +AI ++ W   Q +   +
Sbjct: 10  SFALLGLSFSADAAPPV-------AANAPATLRAEAPADARFRAIYEKEWAWRQAETGQA 62

Query: 62  PEMAYGMGDKSAAGKLQDLSPEALAKLNQGQIAILVQLKALDRSKLSKEDKINAQILEDQ 121
            E     GD +   +L D+ P A          +L QL  +D + LS  +++N  I   Q
Sbjct: 63  DEDTDTTGDNT---RLPDVGPAAQQARLAVWDGVLKQLDGIDPATLSPANQVNYAIYRPQ 119

Query: 122 LQNEVDLYKYKDYYLPITAESGFHAYISSIAQGRFNTQEDYQNYLDKLKALPNYFAQQTY 181
           ++N     + + Y +P  ++S F + +  +AQ    T  +Y+ Y+ +L  +P YF QQ  
Sbjct: 120 VENLAAEVRLRAYEMPFNSDSSFWSNLGFMAQRPMKTAAEYRAYIARLNDVPRYFDQQVA 179

Query: 182 WLKQGLKEGITPPKATLKGFENSIS--AYILPVEKSSYFKPFTQYPNHFTEAQKAQLTQQ 239
            ++ GL  G + P+A L G + SI+  A +    +S+++ PF Q P     A++AQL  Q
Sbjct: 180 NMRAGLARGFSVPRAVLDGRDGSIATVAQVSDPTESTFYAPFKQLPAQIPAAEQAQLRAQ 239

Query: 240 GRALVEQNVIPTYQAFYDFMTQEYMPNTRDNIAANSLPNGDAFYENRVRYYTTLDITSAE 299
            +A V   VIP Y     F   +Y+P  R  +AA ++P+G AFY  ++R YTTLD+T  +
Sbjct: 240 AKAAVSGAVIPAYARLLTFFRNDYVPKARTTLAAEAMPDGKAFYRQQIREYTTLDLTPDQ 299

Query: 300 VHELGLKEVKRIRQEMEQVIKSVGFKGSFADFLYFLRTDPQFYATSADQLLKEAAFIAKK 359
           +H++GL EV RI+ +M  +I+ VGFKGSFA FL FLRTDPQFYA +  +LL  AA+I+K+
Sbjct: 300 IHQIGLDEVARIQTQMNAIIQQVGFKGSFAQFLTFLRTDPQFYAKTPQELLDRAAWISKR 359

Query: 360 ADATLPKYFGKLPRKPYGIAPVPAEIAPKYTSGRYSGSNRDDEPGYYWVNTYALDKRPLY 419
            D  + K+ G LPR  + I PVP +IAP +T+GR   +        YWVNTY L  RPLY
Sbjct: 360 VDGQVGKFIGTLPRGRFTIKPVPDDIAPFWTAGRGGATT-------YWVNTYNLPSRPLY 412

Query: 420 ELEALTLHEAVPGHHLQISLNSELSSQPDFRRYSYISAFGEGWGLYSEYLGLEAGFYQDP 479
            L ALTLHE+ PGH LQ SL  E   QP FRR +YISA+GEGW LY+E LG E G Y+ P
Sbjct: 413 NLPALTLHESSPGHSLQGSLALEQGEQPAFRRENYISAYGEGWALYTEKLGQEMGIYETP 472

Query: 480 YSNFGRLTYEMWRAARLVVDTGMHAQGWSREQAIEFMANNTALSLHNVTTEIDRYITWPG 539
           Y  FGRLTYEMWRA RLV+DTG+H  GWSR+QA+ ++ ++TALS H VTTE+DRYI+WP 
Sbjct: 473 YEEFGRLTYEMWRACRLVIDTGVHHDGWSRDQALAYLRDHTALSEHEVTTEVDRYISWPA 532

Query: 540 QALSYKIGELTIKRLRAKAEQALGDKFDIRAFHDAVLENGSVPMSVLEQQINDFIEAKKA 599
           QALSYK+GE+ I +LRA+AEQALG++FDI+AFHD VL  GSV + VLEQQ+  FI   KA
Sbjct: 533 QALSYKLGEIAIVKLRAEAEQALGERFDIKAFHDVVLRQGSVTLPVLEQQVRAFIAQSKA 592