Pairwise Alignments

Query, 601 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 600 a.a., hypothetical protein from Xanthomonas campestris pv. campestris strain 8004

 Score =  114 bits (284), Expect = 2e-29
 Identities = 138/625 (22%), Positives = 253/625 (40%), Gaps = 80/625 (12%)

Query: 10  LICVLSACSTAKPPAESASQTAVAITQSSVKTMAPALQAIVDQSWQLQLSASPEMAYGMG 69
           L+  LSAC   +PP    +       QS     A   +  +D   QL    SP  A  +G
Sbjct: 10  LLAGLSACQQPEPPRAGTAAVTAQDAQSPDARFAALSKHALDTWMQL----SPVNATQVG 65

Query: 70  DKSAAGKLQDLSPEALAKLNQGQIAILVQLKALDRSKLSKEDKINAQILEDQLQNEV--- 126
           D     +L DLS     +       +L +L ALD SKLS+E++++A IL +QLQ+E+   
Sbjct: 66  DHRFDSQLDDLSTAGRQRSLDAGKQLLTELDALDVSKLSRENQVDAAILRNQLQSEIWNT 125

Query: 127 DLYKYKDYYLPITAESGFHAYISSIAQGRFNTQEDYQNYLDKLKALPNYFAQQTYWLKQG 186
           ++ +   +   +       A  S +A+      E   +   +++ +P+  AQ        
Sbjct: 126 EVLQSWAWDPQVYNGLAGSALYSLMAREFAPLPERLDSATQRMEKIPSLLAQA------- 178

Query: 187 LKEGITPPKATL----------KGFENSISAYILP-VEKSSYFKPFTQYPNHFTEAQKAQ 235
            +E + P +             KG  + +  +I P + + S        P     AQ A 
Sbjct: 179 -RENLDPARVPKIHAETVAKQNKGILSIVDTFIAPNIGQLS--------PPDAARAQAA- 228

Query: 236 LTQQGRALVEQNVIPTYQAFYDFMTQEYMPNTRDNIAANSLPNGDAFYENRVRYYTTLDI 295
           +    +A+ EQ           ++    +PN + +        G   Y+ ++++     +
Sbjct: 229 IDNLKKAVTEQQT---------WLDTVLVPNAKGDFRV-----GADKYDQKLKFALLSSL 274

Query: 296 TSAEVHELGLKEVKRIRQEMEQVIKSVGFKGSFADFLYFLRTDPQFYAT----------- 344
           + AE+ +    E+ R+R EM  + ++V      A  L    +D Q  A            
Sbjct: 275 SRAEIKQRAESELTRVRSEMYGIARTVLKDKPGAPALPDAPSDAQQQAAIEAALELAYAD 334

Query: 345 --SADQLLKEA-AFIAKKADATLPKYFGKLPRKPYGIAPVPA---EIAPKYTSGR----- 393
             + D+++ +A A +A+  +    K    LP  P  I  +P     +A  Y         
Sbjct: 335 KPARDKVVDDAKAALAQSTEFVRQKDLMTLPDSPVDIILMPEFQRGVAVAYCDSPGPLDK 394

Query: 394 -----YSGSNRDDEPGYYWVNTYALDKRPLYELEALTLHEAVPGHHLQISLNSELSSQPD 448
                Y+ S   D+     V+++  +      +  L++HE  PGH+L+   + +  S   
Sbjct: 395 NLKTFYAVSPIPDDWNAKQVDSFLREYNSRM-IHLLSIHEGTPGHYLEGWHSGKFPST-- 451

Query: 449 FRRYSYISAFGEGWGLYSEYLGLEAGFYQ-DPYSNFGRLTYEMWRAARLVVDTGMHAQGW 507
            R       F EGW +Y+E +  E G+   DP  +  +L + +   A  ++D G+H  GW
Sbjct: 452 LRAVLRSGMFAEGWAVYTERMMQEQGYLDNDPLFHLVQLKFYLRTIANAILDQGVHVDGW 511

Query: 508 SREQAIEFMANNTALSLHNVTTEIDRYITWPGQALSYKIGELTIKRLRAKAEQALGDKFD 567
            R++A+  M ++T       + +  R      Q  +Y +G       R   +  LG  F+
Sbjct: 512 DRDKAMHLMTHDTFQQESEASGKWVRAQLSSAQLPTYFVGVQEHLDTRKAVQDKLGSTFN 571

Query: 568 IRAFHDAVLENGSVPMSVLEQQIND 592
           ++A+HD +L  G+ P+    + + D
Sbjct: 572 LKAYHDKILSYGAPPVRFARELMLD 596