Pairwise Alignments

Query, 601 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 625 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  333 bits (853), Expect = 2e-95
 Identities = 212/616 (34%), Positives = 325/616 (52%), Gaps = 30/616 (4%)

Query: 4   LFTPSLLICVLSACS-TAKPPAESASQ--TAVAITQSSVKTMAPALQAIVDQSWQLQLSA 60
           L   SLL+ + SA S TA+   +  +Q  TA  +T  S K       A+ +  +   + A
Sbjct: 13  LIAASLLLALGSASSFTAQAETQGTAQQGTAQQVTSESAKA-----NALFETQFMENVMA 67

Query: 61  SPEMAYGMGDKSAA-GKLQDLSPEALAKLNQGQIAILVQLKALDRSKLSKEDKINAQILE 119
           SP     MG K    GK  ++S  A A+  +     L +L+A+D + L  +  ++  +  
Sbjct: 68  SPISQTLMGIKGEDYGKWDEISEAADARELERAKRHLAELRAIDANALDSQTALSLALAL 127

Query: 120 DQLQNEVDLYKYKDYYLPITAESGFHAYISSIA--QGRFNTQEDYQNYLDKLKALPNYFA 177
             L+NE+  YK++ +  P+    G H+  +SI   Q   +  +D + Y+ +L A+P  F+
Sbjct: 128 QSLENEIADYKWRLHNYPVNQMYGVHSLTASILINQHTVDNLDDAKAYISRLNAVPKRFS 187

Query: 178 QQTYWLKQGLKEGITPPKATLKGFENSISAYIL--PVEK---SSYFKPFTQYPN--HFTE 230
           +    L+    +GI  P+       N     I   P E+   S+ +  F +  +  +   
Sbjct: 188 ELKDALELRAAKGIIAPRFVFPLVINDSRNIIKGEPFEEGEDSTLWADFKRKVDALNLDA 247

Query: 231 AQKAQLTQQGRALVEQNVIPTYQAFYDFM-TQEYMPNTRDNIAANSLPNGDAFYENRVRY 289
             K  L  + +  +   V P Y     ++ T E   +TRD +    LP+G+ FY N ++ 
Sbjct: 248 TTKENLFSEAKLALNNAVKPAYDDLIVYLNTLEQKADTRDGVW--KLPDGNDFYNNALKR 305

Query: 290 YTTLDITSAEVHELGLKEVKRIRQEMEQVIKSVGFKGSFADFLYFLRTDPQFYATSADQ- 348
            TT D+ +  +HELGLKEV RI  EM  ++K VGFKGS  DF  F+R D QFY    D  
Sbjct: 306 TTTTDMDAIAIHELGLKEVARIHNEMRDIMKEVGFKGSLNDFFIFMRNDEQFYYPDTDDG 365

Query: 349 ---LLKEAAFIAKKADATLPKYFGKLPRKPYGIAPVPAEIAPKYTSGR--YSGSNRD-DE 402
               + +A  +     A L + F   P+   G+   P E   + ++G+  Y     D   
Sbjct: 366 KAAYINDAKALIDNMSARLDEVFAIKPKA--GLIVKPVESFREKSAGKAFYDQPAPDGSR 423

Query: 403 PGYYWVNTYALDKRPLYELEALTLHEAVPGHHLQISLNSELSSQPDFRRYSYISAFGEGW 462
           PG Y+ N Y++   P Y++EAL  HE +PGHH+QI++  EL   P FRR+   +A+ EGW
Sbjct: 424 PGTYYANLYSMKAMPKYQMEALAYHEGLPGHHMQIAIAQELEGIPKFRRFGRYTAYVEGW 483

Query: 463 GLYSEYLGLEAGFYQDPYSNFGRLTYEMWRAARLVVDTGMHAQGWSREQAIEFMANNTAL 522
           GLY+E+   E G YQDPYSNFGRL  E+WRA RLVVDTG+HA+ W+REQ I +   NT  
Sbjct: 484 GLYTEFFPREMGLYQDPYSNFGRLAMELWRACRLVVDTGIHAKKWTREQGIAYYKENTPN 543

Query: 523 SLHNVTTEIDRYITWPGQALSYKIGELTIKRLRAKAEQALGDKFDIRAFHDAVLENGSVP 582
           +  +    ++R+I  P QA +YK+G   I  LRA A+++LGD FDIR FH  +L+NG +P
Sbjct: 544 AESDAVKMVERHIVMPSQATAYKVGMNRILDLRAYAQKSLGDAFDIREFHTLLLKNGPLP 603

Query: 583 MSVLEQQINDFIEAKK 598
           + VLE ++ ++++  K
Sbjct: 604 LDVLETKVQEWVKDSK 619