Pairwise Alignments

Query, 601 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 595 a.a., putative lipoprotein (RefSeq) from Shewanella amazonensis SB2B

 Score = 89.4 bits (220), Expect = 4e-22
 Identities = 129/618 (20%), Positives = 236/618 (38%), Gaps = 74/618 (11%)

Query: 8   SLLICVLSACSTAKPPAESASQ-TAVAITQSSVKTMAPALQAIVDQSWQLQLSASPEMAY 66
           SL    L AC+ +   +      TA ++T    ++ A   +A +D  WQ+    +P  A 
Sbjct: 11  SLAALSLGACTDSTTSSGHVQHATASSVTSQQTQSFASFSEAFIDSLWQV----APTWAL 66

Query: 67  GMGDKSAAGKLQDLSPEALAKLNQGQIAILVQLKALDRSKLSKEDKINAQILEDQLQN-E 125
             G     G L+       AK      +    L+A +   LS  + I+ +++E+ L + E
Sbjct: 67  YSGYHKYDGILEVADEAQRAKTLAFVNSQREMLQAFNTKNLSTSELIDYRLIENLLNSVE 126

Query: 126 VDLYKYKDYYLPITAESGFHAYISSIAQGRFNTQEDYQNYLDKLKALPNYFAQQTYWLKQ 185
            +  +++ +    +  +    +   I +      E  ++ + +L+ +P Y+        +
Sbjct: 127 WEQTRFRAWQWDPSGYNVAGGFAQIINEDFAPLDERLRSVVSRLENVPAYY--------E 178

Query: 186 GLKEGITPPKATLKGFENSISAYILPVEKSSYFKPFTQYPNHFTEAQKAQLTQQGRALVE 245
             ++ I  P  TL+  E ++      ++    F  F        + + + LT   + L +
Sbjct: 179 AARKNIKNP--TLEHTELAL------LQNQGAFSVFND--ELIAKVESSGLTDAEKTLFK 228

Query: 246 QNVIPTYQAFYDFMTQ-EYMPNTRDNIAANSLPNGDAFYENRVRYYTTLDITSAEVHELG 304
           Q       A  + +   E + N      A     G+A YE +        +T+  ++   
Sbjct: 229 QRFDAAISAINEHIIWLETLSNNLKVNGARDFRIGEALYEEKFALDIQSGMTAKALYNKA 288

Query: 305 LKEVKRIRQEMEQVIKSVGFKGSFADFLYFLRTDPQFYATSADQLL-KEAAFIAKKAD-- 361
             ++ R+  EM ++ K +  K       YF  T P     +   L+ K +A   K+ D  
Sbjct: 289 SADMVRVHAEMARITKEIWSK-------YFTETMPDDSKVATRMLIDKLSAKHVKREDFV 341

Query: 362 ----ATLPKYFGKL---------PRKPYGIAPVPAEIAPKYTSGRYSGSNRDDEPGYYWV 408
               A +P+    +         P KP  +   P E    Y     S     D+ G  + 
Sbjct: 342 NEVRAQIPELVKFVNDKQLITLDPNKPLVVRETP-EYMRGYAGASISAPGPYDKGGNTYY 400

Query: 409 NTYALD------------KRPLYELEALTLHEAVPGHHLQISLNSELSSQPDFRRYSYIS 456
           N   LD            +   + L+ L +HEA+PGH+ Q+  ++E  S    +      
Sbjct: 401 NVTPLDGMSDESAESYLREYNHWILQVLNIHEAIPGHYTQLVYSNESPSL--IKSLFGNG 458

Query: 457 AFGEGWGLYSEYLGLEAGFYQDPYSNFGR---LTYEMWRA---ARLVVDTGMHAQGWSRE 510
           A  EGW +Y+E + LE G     Y NF     L Y  W     A  ++D  +  +G ++E
Sbjct: 459 AMVEGWAVYTERMMLEEG-----YGNFEPEMWLMYYKWNLRVIANTILDYSIQVKGMTQE 513

Query: 511 QAIEFMANNTALSLHNVTTEIDRYITWPGQALSYKIGELTIKRLRAKAEQALGDKFDIRA 570
           +A+  M             +  R      Q  SY  G   I   R + +    + FD++A
Sbjct: 514 EAMTLMMEEAFQQEAEAAGKWRRATLSQVQLTSYYAGYREIYDFREELKAKSPESFDLKA 573

Query: 571 FHDAVLENGSVPMSVLEQ 588
           FH+  L  GS P+  + +
Sbjct: 574 FHERFLSFGSAPVKYIRE 591