Pairwise Alignments

Query, 601 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 609 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  348 bits (892), Expect = e-100
 Identities = 195/597 (32%), Positives = 324/597 (54%), Gaps = 11/597 (1%)

Query: 11  ICVLSACSTAKPPAESASQTAVA--ITQSSVKTMAPALQAIVDQSWQLQLSASPEMA--Y 66
           +  LS CS     A S +          +S +T      A+VD  ++  L   P  A  +
Sbjct: 13  VFALSGCSQENTAAVSGTNVDAQGRAAVASEETAQSRYLAMVDSYFKDFLKLEPIYATFF 72

Query: 67  GMGDKSAAGKLQDLSPEALAKLNQGQIAILVQLKALDRSKLSKEDKINAQILEDQLQNEV 126
           G+ D +A     DLS E L   +      L Q + +D+S L  + +++  +        +
Sbjct: 73  GVNDYNAEFG-GDLSDEYLKARHDYNTRYLAQARKIDKSALPADLQLSYDLFVYDRNMAL 131

Query: 127 DLYKYKDYYLPITAESGFHAYISSIAQGR----FNTQEDYQNYLDKLKALPNYFAQQTYW 182
               +   +LP+         +  +  G     F T++DY N+  ++     +  +    
Sbjct: 132 VDETFPARFLPMNQFYSTVITMIQLGSGEAAQPFVTKQDYLNWESRVDGFIAWLERAQAR 191

Query: 183 LKQGLKEGITPPKATLKGFENSISAY-ILPVEKSSYFKPFTQYPNHFTEAQKAQLTQQGR 241
           + +G+   +  P+  ++      +A  +  V+ S ++ P    P  F+E  +A++  + +
Sbjct: 192 MNEGMASKVVLPRILVERMIPQFTAQQVTDVKDSIFYAPVKSLPETFSEQDRAEIEARYQ 251

Query: 242 ALVEQNVIPTYQAFYDFMTQEYMPNTRDNIAANSLPNGDAFYENRVRYYTTLDITSAEVH 301
           A++ Q ++P      DF+   Y+P  R     + LPNG A+Y++    +TT   +  E+H
Sbjct: 252 AMIAQRLLPALAKMEDFLKDTYLPAARATDGWSGLPNGKAWYQHLANLHTTTGKSVDEIH 311

Query: 302 ELGLKEVKRIRQEMEQVIKSVGFKGSFADFLYFLRTDPQFYATSADQLLKEAAFIAKKAD 361
           E GL EV RI  EM++V + VGF+G    F   L ++PQ++ T   +L+     +    +
Sbjct: 312 ETGLNEVARILSEMDKVRQQVGFEGGLKAFFASLSSEPQYFFTERQELIDGYMALKDTIN 371

Query: 362 ATLPKYFGKLPRKPYGIAPVPAEIAPKYTSGRYSGSNRD-DEPGYYWVNTYALDKRPLYE 420
             LP+YF  +P+  Y + PV +          Y     D   PG +++NTY L  +P + 
Sbjct: 372 QVLPQYFNVMPKADYVVKPVESFREQSAAGASYESPAVDGSRPGVFYINTYNLKAQPKWG 431

Query: 421 LEALTLHEAVPGHHLQISLNSELSSQPDFRRYSYISAFGEGWGLYSEYLGLEAGFYQDPY 480
           +  L+LHEA PGHH QI++  EL+  P+F+R+S  +AF EGW LY+EYLG+E G + DPY
Sbjct: 432 MTTLSLHEAAPGHHFQIAIKQELTGVPEFQRFSGYTAFEEGWALYAEYLGIEMGLFSDPY 491

Query: 481 SNFGRLTYEMWRAARLVVDTGMHAQGWSREQAIEFMANNTALSLHNVTTEIDRYITWPGQ 540
             FG+L+ EM RA RLVVDTG+HA+GWSREQAI++M +N+ ++  ++  E++RY+  PGQ
Sbjct: 492 QYFGKLSDEMLRAMRLVVDTGLHAKGWSREQAIQYMKDNSPMAESDIIAEVERYMAIPGQ 551

Query: 541 ALSYKIGELTIKRLRAKAEQALGDKFDIRAFHDAVLENGSVPMSVLEQQINDFIEAK 597
           ALSYK+G+L I  LRA AE+ LGDKF + AFHD +L +GS+PM+V+EQ+++ +++++
Sbjct: 552 ALSYKVGQLKILELRADAEKRLGDKFSLPAFHDQILTSGSLPMAVMEQKVDRWVKSQ 608