Pairwise Alignments

Query, 601 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 619 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  885 bits (2287), Expect = 0.0
 Identities = 434/619 (70%), Positives = 508/619 (82%), Gaps = 19/619 (3%)

Query: 1   MHKLFTPSLLICVLSA----CSTAKPPAES---------------ASQTAVAITQSSVKT 41
           MHKLF PSLL   L+     C+     +++               A +   A  +++   
Sbjct: 1   MHKLFKPSLLALALAGTLAGCNVNTTASDAYRYSYDANRAQQRPAAEEPKAAEVKAAPVI 60

Query: 42  MAPALQAIVDQSWQLQLSASPEMAYGMGDKSAAGKLQDLSPEALAKLNQGQIAILVQLKA 101
           +   LQ+I+D++WQL L  SP +AY  GDKSAAGKL DLSPE LA+    + ++L  LKA
Sbjct: 61  LDKNLQSIIDKAWQLDLEISPSLAYDQGDKSAAGKLADLSPERLAETQLKRQSLLASLKA 120

Query: 102 LDRSKLSKEDKINAQILEDQLQNEVDLYKYKDYYLPITAESGFHAYISSIAQGRFNTQED 161
           LDRSKLSKED+INA IL+ Q+QN+VD+Y++KD+Y+PI++E GFHAYI+S+A+G F T+ED
Sbjct: 121 LDRSKLSKEDRINADILQGQIQNDVDMYQFKDHYMPISSEGGFHAYIASMAKGSFKTRED 180

Query: 162 YQNYLDKLKALPNYFAQQTYWLKQGLKEGITPPKATLKGFENSISAYILPVEKSSYFKPF 221
           Y NYL KL ALP YFAQQT+WL+QGL  GITPPK TLKGFE+SISA+++PVE S+YF PF
Sbjct: 181 YDNYLAKLNALPQYFAQQTFWLRQGLTSGITPPKVTLKGFEDSISAFMVPVEDSTYFAPF 240

Query: 222 TQYPNHFTEAQKAQLTQQGRALVEQNVIPTYQAFYDFMTQEYMPNTRDNIAANSLPNGDA 281
            ++P HF+ A+KA+LTQ GR  V + V+P YQAFYDFMT EYMPN R+ IAA  +PNG  
Sbjct: 241 KEFPAHFSAAEKAELTQAGRKAVAEKVLPQYQAFYDFMTGEYMPNARETIAAYDMPNGQD 300

Query: 282 FYENRVRYYTTLDITSAEVHELGLKEVKRIRQEMEQVIKSVGFKGSFADFLYFLRTDPQF 341
           FYENRVRYYTTLD+TS EVH+LGLKEV RIR EME VIKS GFKGSF +FL+FLRTDP+F
Sbjct: 301 FYENRVRYYTTLDMTSDEVHQLGLKEVARIRAEMEAVIKSTGFKGSFDEFLHFLRTDPRF 360

Query: 342 YATSADQLLKEAAFIAKKADATLPKYFGKLPRKPYGIAPVPAEIAPKYTSGRYSGSNRDD 401
           YAT+ +QLLKEAA+IAKKADA LPK+FGKLPR+PYGI PVPAEIAPKYT+GRYSGS+  D
Sbjct: 361 YATTPEQLLKEAAYIAKKADAMLPKFFGKLPRQPYGIEPVPAEIAPKYTTGRYSGSSAPD 420

Query: 402 EPGYYWVNTYALDKRPLYELEALTLHEAVPGHHLQISLNSELSSQPDFRRYSYISAFGEG 461
           + GYYWVNTYALDKRPLYE+EALTLHEAVPGHHLQI+LN EL   P+FRRYSYISAFGEG
Sbjct: 421 KAGYYWVNTYALDKRPLYEMEALTLHEAVPGHHLQIALNQELDQLPNFRRYSYISAFGEG 480

Query: 462 WGLYSEYLGLEAGFYQDPYSNFGRLTYEMWRAARLVVDTGMHAQGWSREQAIEFMANNTA 521
           WGLYSEYLGLE GFY DPYSNFGRLTYEMWRAARLVVDTGMHA+GWSR+QAI+FMA NTA
Sbjct: 481 WGLYSEYLGLEGGFYTDPYSNFGRLTYEMWRAARLVVDTGMHAKGWSRQQAIDFMAGNTA 540

Query: 522 LSLHNVTTEIDRYITWPGQALSYKIGELTIKRLRAKAEQALGDKFDIRAFHDAVLENGSV 581
           LSLHNV TEIDRYI+WPGQA+SYKIGELTIKRLRAKAE  LG+KFDIRAFHDAVL +GSV
Sbjct: 541 LSLHNVNTEIDRYISWPGQAVSYKIGELTIKRLRAKAEAELGEKFDIRAFHDAVLAHGSV 600

Query: 582 PMSVLEQQINDFIEAKKAA 600
           P+SVLEQQINDFI A KAA
Sbjct: 601 PLSVLEQQINDFIAAAKAA 619