Pairwise Alignments

Query, 601 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 594 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score =  909 bits (2348), Expect = 0.0
 Identities = 441/599 (73%), Positives = 519/599 (86%), Gaps = 6/599 (1%)

Query: 1   MHKLFTPSLLICVLSACSTAKPPAESASQTAVAITQSSVKTMAPALQAIVDQSWQLQLSA 60
           M+K   P LL+  L+AC  A P A+ A+    +++QS  +     LQ I+D +WQL+L +
Sbjct: 1   MYKPLAPCLLLLSLTACQMA-PTADVATTPKTSVSQSHQQ-----LQRIMDDAWQLRLES 54

Query: 61  SPEMAYGMGDKSAAGKLQDLSPEALAKLNQGQIAILVQLKALDRSKLSKEDKINAQILED 120
           SPEMAY  GD++AAGKL DLSPEALA  NQ + A+L +L ALD + L+K D+I+AQIL  
Sbjct: 55  SPEMAYAQGDETAAGKLDDLSPEALANHNQAEQALLARLNALDLASLNKADRIDAQILIY 114

Query: 121 QLQNEVDLYKYKDYYLPITAESGFHAYISSIAQGRFNTQEDYQNYLDKLKALPNYFAQQT 180
           QLQN VD Y++ D+YLPITAESGFHAYI+SIA+G FN++ DY+NYL KL+ALP YF+QQT
Sbjct: 115 QLQNSVDQYRFHDHYLPITAESGFHAYIASIAKGNFNSEADYRNYLSKLEALPRYFSQQT 174

Query: 181 YWLKQGLKEGITPPKATLKGFENSISAYILPVEKSSYFKPFTQYPNHFTEAQKAQLTQQG 240
           YWLKQGL +GITP +  L GFE SISA+I+PVE+S YFKPFT +P HFT+AQKA+LT+QG
Sbjct: 175 YWLKQGLAQGITPARVVLNGFEESISAFIVPVEQSGYFKPFTHFPKHFTQAQKAELTEQG 234

Query: 241 RALVEQNVIPTYQAFYDFMTQEYMPNTRDNIAANSLPNGDAFYENRVRYYTTLDITSAEV 300
           +AL+EQNV+P+YQAFYDFMTQEY+P  R++IAA  LP+G AFYENRVRYYTTL +T+ EV
Sbjct: 235 KALIEQNVLPSYQAFYDFMTQEYIPGARESIAAYDLPDGKAFYENRVRYYTTLPMTADEV 294

Query: 301 HELGLKEVKRIRQEMEQVIKSVGFKGSFADFLYFLRTDPQFYATSADQLLKEAAFIAKKA 360
           H+LGLKEVKRIR EM+ +I  +G++GSFADFL+FLRTDPQFYA + +QLLKEAAFIAKKA
Sbjct: 295 HQLGLKEVKRIRAEMQAIIDKLGYQGSFADFLHFLRTDPQFYAKTPEQLLKEAAFIAKKA 354

Query: 361 DATLPKYFGKLPRKPYGIAPVPAEIAPKYTSGRYSGSNRDDEPGYYWVNTYALDKRPLYE 420
           DA LPK+FGKLPR PYGI  VPAEIAPKYT+GRYSG++ DD+PGYYWVNTYALDKRPLYE
Sbjct: 355 DAMLPKFFGKLPRTPYGIQEVPAEIAPKYTTGRYSGASGDDQPGYYWVNTYALDKRPLYE 414

Query: 421 LEALTLHEAVPGHHLQISLNSELSSQPDFRRYSYISAFGEGWGLYSEYLGLEAGFYQDPY 480
           LEALTLHEAVPGHHLQISLN EL+S P+FRRYSYISAFGEGWGLYSEYLGLE GFYQDPY
Sbjct: 415 LEALTLHEAVPGHHLQISLNKELTSLPNFRRYSYISAFGEGWGLYSEYLGLEGGFYQDPY 474

Query: 481 SNFGRLTYEMWRAARLVVDTGMHAQGWSREQAIEFMANNTALSLHNVTTEIDRYITWPGQ 540
           SNFGRLTYEMWRAARLVVDTGMHA+GW+R+QAI++MA NTALSLHNVTTEIDRYI+WPGQ
Sbjct: 475 SNFGRLTYEMWRAARLVVDTGMHAKGWTRQQAIDYMAGNTALSLHNVTTEIDRYISWPGQ 534

Query: 541 ALSYKIGELTIKRLRAKAEQALGDKFDIRAFHDAVLENGSVPMSVLEQQINDFIEAKKA 599
           ALSYKIGELTIKRLRAKAEQALG+KFDIRAFHDAVL NGSVPM++LEQQI+DFI A+ A
Sbjct: 535 ALSYKIGELTIKRLRAKAEQALGEKFDIRAFHDAVLANGSVPMALLEQQIDDFIAAQAA 593