Pairwise Alignments

Query, 601 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 587 a.a., DUF885 family protein from Dyella japonica UNC79MFTsu3.2

 Score =  480 bits (1236), Expect = e-140
 Identities = 247/556 (44%), Positives = 346/556 (62%), Gaps = 11/556 (1%)

Query: 43  APALQAIVDQSWQLQLSASPEMAYGMGDKSAAGKLQDLSPEALAKLNQGQIAILVQLKAL 102
           A     I +Q W  +   +     G    S A +L D+   +  +  +     L  L A+
Sbjct: 21  AARFHRIYEQEWAWRNGQAGINNAGEAQPSNA-RLDDVDAASQQRRLEMWKKTLADLDAI 79

Query: 103 DRSKLSKEDKINAQILEDQLQNEVDLYKYKDYYLPITAESGFHAYISSIAQG-RFNTQED 161
           D  +L  EDKIN  +   Q+QN +   +YK + +P  ++S F + +  +       T +D
Sbjct: 80  DPKQLGAEDKINYAVYRTQIQNMLAGQQYKQWQMPFNSDSAFWSDLGYVLNADELRTPQD 139

Query: 162 YQNYLDKLKALPNYFAQQTYWLKQGLKEGITPPKATLKGFENSISAY--ILPVEKSSYFK 219
           Y+ YLD+L  +P YF QQ   ++ GL  G T P+A L G + SI+A   +    KSS++K
Sbjct: 140 YRRYLDRLGQVPAYFDQQIANMRDGLDRGFTVPRAVLDGRDVSIAAVAELKDPTKSSFYK 199

Query: 220 PFTQYPNHFTEAQKAQLTQQGRALVEQNVIPTYQAFYDFMTQEYMPNTRDNIAANSLPNG 279
           P        +    A++ ++ +  + Q VIP Y     F  +EY+P  R  +AA ++P+G
Sbjct: 200 PLENVSTSVSAEDAARMREEAKQTIAQKVIPAYARLLKFFREEYLPRARTTLAAEAMPDG 259

Query: 280 DAFYENRVRYYTTLDITSAEVHELGLKEVKRIRQEMEQVIKSVGFKGSFADFLYFLRTDP 339
            A+Y  ++  YTTLD+    +H++GL++V +I  +M + ++  GFKGSF +FL FLRTDP
Sbjct: 260 KAWYRQQILEYTTLDLDPGAIHQVGLEQVAKIHAQMVKTMQESGFKGSFPEFLKFLRTDP 319

Query: 340 QFYATSADQLLKEAAFIAKKADATLPKYFGKLPRKPYGIAPVPAEIAPKYTSGRYSGSNR 399
           QF+A + ++LL  +A++AK+ D  L K+FG+LPR+ + I PV  +IAP YTSGR   S  
Sbjct: 320 QFHAKTPEELLMRSAWVAKQVDGQLGKFFGRLPRQRFAIVPVAPDIAPYYTSGRGGASA- 378

Query: 400 DDEPGYYWVNTYALDKRPLYELEALTLHEAVPGHHLQISLNSELSSQPDFRRYSYISAFG 459
                 Y VNTY L  RPLY + ALTLHE+ PGH LQ++L +E   QP FRR  YISA+G
Sbjct: 379 ------YLVNTYDLPSRPLYNVAALTLHESAPGHSLQLALAAEQKGQPAFRRQGYISAYG 432

Query: 460 EGWGLYSEYLGLEAGFYQDPYSNFGRLTYEMWRAARLVVDTGMHAQGWSREQAIEFMANN 519
           EGWGLYSEYLG E G Y+ PY  FG LTY+MWRA RLVVDTG+H  GW+R+QAI+++ +N
Sbjct: 433 EGWGLYSEYLGNEMGIYKTPYDRFGYLTYQMWRACRLVVDTGIHHMGWTRQQAIDYLTDN 492

Query: 520 TALSLHNVTTEIDRYITWPGQALSYKIGELTIKRLRAKAEQALGDKFDIRAFHDAVLENG 579
           TALS   +  E+DRYI+WPGQALSY++G L I  LR KAEQ LG +FDIR FHD +LE G
Sbjct: 493 TALSAREIANEVDRYISWPGQALSYELGYLKILELRRKAEQDLGTRFDIRHFHDTLLEIG 552

Query: 580 SVPMSVLEQQINDFIE 595
           SVP+ VLEQ+I+ FIE
Sbjct: 553 SVPLPVLEQRIDRFIE 568