Pairwise Alignments

Query, 601 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 608 a.a., DUF885 family protein from Dyella japonica UNC79MFTsu3.2

 Score =  355 bits (912), Expect = e-102
 Identities = 210/600 (35%), Positives = 321/600 (53%), Gaps = 16/600 (2%)

Query: 8   SLLIC--VLSACSTAKPPAESASQTAVAITQSSVKTMAPALQAIVDQSWQLQLSASPEMA 65
           S +IC  +L + + A P A +      A   + VKT    L A++ + WQ  L  SPE A
Sbjct: 5   SWMICASLLGSVTVAGPVAAAPPAAPAAGVAARVKT----LNALLAEQWQHNLQNSPEFA 60

Query: 66  YGMGDKSAAGKLQDLSPEALAKLNQGQIAILVQLKALDRSKLSKEDKINAQILEDQLQNE 125
             +GD     +  D+S    A   +     L + +A+D +  + EDK+N Q++  QL+  
Sbjct: 61  TILGDLRYNERWSDVSLAHQAAERKVNAEFLKRFEAIDTTGFADEDKLNQQLMVRQLKEA 120

Query: 126 VDLYKYKDYYLPITAESGFH----AYISSIAQGRFNTQEDYQNYLDKLKALPNYFAQQTY 181
           +  Y  K   +P+   +G H     ++SSI    F++   Y++YL +L A+P    Q + 
Sbjct: 121 LKSYDLKLNEMPLDQMNGMHLQLPGFVSSIP---FDSARQYEDYLARLHAVPRVLEQVSE 177

Query: 182 WLKQGLKEGITPPKATLKGFENSISAYILPV-EKSSYFKPFTQYPNHFTEAQKAQLTQQG 240
             +QGLK+G+ PP+  L+     I +   P  E++S+ +P   +P     A++ +L    
Sbjct: 178 VARQGLKDGMMPPRYLLEKVVGQIDSIARPAGEENSFAEPLKHFPKSIPAAEQKRLHDAI 237

Query: 241 RALVEQNVIPTYQAFYDFMTQEYMPNTRDNIAANSLPNGDAFYENRVRYYTTLDITSAEV 300
            A ++  V P Y+    F+ ++Y P+ R       L NGDA Y   V   TT   T   +
Sbjct: 238 VAAIDNEVRPAYRKLGQFVAKDYAPHGRSEPGVWQLANGDAIYRFDVEQMTTTRETPQRI 297

Query: 301 HELGLKEVKRIRQEMEQVIKSVGFKGSFADFLYFLRTDPQFYATSADQLLKEAAFIAKKA 360
           HE+GL EVKRI  EM  + K  G++   A F   L+ D +   TS + +L        + 
Sbjct: 298 HEIGLAEVKRIEDEMTVIAKGQGYQ-DLASFREALKHDAKLNPTSREDILNRYRGFIAQM 356

Query: 361 DATLPKYFGKLPRKPYGIAPVPAEIAPKYTSGRY-SGSNRDDEPGYYWVNTYALDKRPLY 419
              LPK FG LPR    + PV A    +     Y  G+     PG  +VNT     R   
Sbjct: 357 QPELPKLFGLLPRTKVQVMPVEAYREKEAPGAEYHQGTPDGSRPGQVYVNTGDYADRTTL 416

Query: 420 ELEALTLHEAVPGHHLQISLNSELSSQPDFRRYSYISAFGEGWGLYSEYLGLEAGFYQDP 479
            +E+   HEA+PGHH+QIS+   L   P FR+ +  +A+ EGW LY+E LG + GFY+DP
Sbjct: 417 TIESTAYHEAIPGHHMQISIAQALPGLPPFRQQAGYNAYVEGWALYAERLGKDIGFYKDP 476

Query: 480 YSNFGRLTYEMWRAARLVVDTGMHAQGWSREQAIEFMANNTALSLHNVTTEIDRYITWPG 539
            S++GRL+ E+ RA RLV+DTG+H + W+R+Q ++F   +++    ++  E DRYITWPG
Sbjct: 477 LSDYGRLSDELLRADRLVLDTGVHYKHWTRQQMVDFFHAHSSQDEPDIQAETDRYITWPG 536

Query: 540 QALSYKIGELTIKRLRAKAEQALGDKFDIRAFHDAVLENGSVPMSVLEQQINDFIEAKKA 599
           QAL YK+G+L I  LR +A + LG++FDIRAFHD +L  G++P+ VLE + + +I   KA
Sbjct: 537 QALGYKMGQLKILELRERARKELGERFDIRAFHDRILGGGALPLDVLEARTDAWIADVKA 596