Pairwise Alignments

Query, 601 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 607 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3

 Score =  317 bits (811), Expect = 1e-90
 Identities = 206/584 (35%), Positives = 313/584 (53%), Gaps = 45/584 (7%)

Query: 47  QAIVDQSWQLQLSASPEMAYGMGDKSAAG------KLQDLSPEALAKLNQGQIAILVQLK 100
           +A +D+S       SPE    +G   + G       L D SP A+ K          Q++
Sbjct: 36  RAFLDRSMVKMAFESPETLTSLGFLESVGITGHNALLDDDSPAAMDKT-------FTQVR 88

Query: 101 ALDRSKLSKEDKI---NAQILEDQLQNEVDL------YKYKDYYLPIT----AESGFHAY 147
           AL  + LS +D     N +I +D      D       Y+Y +Y  P+      ++G+ ++
Sbjct: 89  ALRDTLLSYQDTDLDDNQRISKDIALYLADFALASEPYRYHNY--PVNQLFGVQNGYPSF 146

Query: 148 ISSIAQGRFNTQEDYQNYLDKLKALPNYFAQQTYWLKQGLKEGITPPKATLKGFENSISA 207
           +   AQ + ++ ED +NYL +L A+   F Q    LK    +GI PPK  ++     ++ 
Sbjct: 147 MQ--AQHQVHSVEDAENYLSRLIAVKTKFGQTLEGLKLREAKGIIPPKFVIERVLTEMND 204

Query: 208 YI-LPVEKSSYFKPFTQY--PNHFTEAQKAQLTQQGRALVEQNVIPTYQAFYDFMTQ-EY 263
           +I  PVE +  +  F         +  ++A+L  Q +A +E +V P Y+ F D+ T  + 
Sbjct: 205 FINAPVEDNILYSSFKTKLADTQISADEQARLLAQAKANIESDVKPAYRLFIDYFTALQA 264

Query: 264 MPNTRDNIAANSLPNGDAFYENRVRYYTTLDITSAEVHELGLKEVKRIRQEMEQVIKSVG 323
              T D   A  LPNGD  YE  ++++TT + ++ E+H  GL EV RI+ E+  ++ + G
Sbjct: 265 KAGTDDGYWA--LPNGDVAYEQLLKFFTTTNYSADEIHAKGLAEVSRIQDEIMTILAAQG 322

Query: 324 FKGS--FADFLYFLRTDPQFYATSAD----QLLKEAAFIAKKADATLPKYFGKLPRKPYG 377
           +  S  F+  +  L  DP+FY   +D    Q+L +   I  + +A L   F   P+    
Sbjct: 323 YDTSQGFSVAIEALAADPKFYYEDSDAGRAQILVDYQKILDEVNAGLDNAFRIRPKAGME 382

Query: 378 IAPVPAEIAPKYTSGRYSGSNRDD--EPGYYWVNTYALDKRPLYELEALTLHEAVPGHHL 435
           +  +P E   K   G Y      D   PG ++ N + +   P Y +  L  HE +PGHH 
Sbjct: 383 VVRIP-EFKEKTAPGAYYQQPAIDGSRPGRFYANLFDIKATPKYGMRTLAYHEGIPGHHF 441

Query: 436 QISLNSELSSQPDFRRYSYISAFGEGWGLYSEYLGLEAGFYQDPYSNFGRLTYEMWRAAR 495
           QI++  EL  QP  R+ +  +A+ EGW LYSE L  E GF QDP+ N GRL  E++RA R
Sbjct: 442 QIAVAMELEGQPLIRKMAPFTAYIEGWALYSERLAWELGFQQDPFDNIGRLQAELFRAVR 501

Query: 496 LVVDTGMHAQGWSREQAIEFMANNTALSLHNVTTEIDRYITWPGQALSYKIGELTIKRLR 555
           LVVDTG+H   W+REQAI++M  NT +S  +VT EI+RYI  PGQA +YK+G + I  LR
Sbjct: 502 LVVDTGIHHSRWTREQAIDYMKQNTGMSDRDVTAEIERYIVMPGQATAYKVGMMKILELR 561

Query: 556 AKAEQALGDKFDIRAFHDAVLENGSVPMSVLEQQINDFIEAKKA 599
            KA+QALGDKFD+R FHD VL+NG+VP+ +LE+ ++ +I  K++
Sbjct: 562 EKAKQALGDKFDLRDFHDVVLKNGAVPLDILEKLVDRYIAEKRS 605