Pairwise Alignments

Query, 601 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 611 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3

 Score =  375 bits (962), Expect = e-108
 Identities = 207/604 (34%), Positives = 341/604 (56%), Gaps = 18/604 (2%)

Query: 10  LICVLSACSTAKPPA---ESASQTAVAITQSSVKTMAPALQAIVDQSWQLQLSASPEMAY 66
           L+  L  CS  +  A   E ++ +A A  Q+  +T      A+VD  ++  L   P  A 
Sbjct: 12  LVFALQGCSKPETTAAVQEGSAPSAPAQAQTETQTAESKYAALVDAYFKDYLKLEPIYAT 71

Query: 67  GMGDKSAAGKLQ-DLSPEALAKLNQGQIAILVQLKALDRSKLSKEDKIN-AQILEDQLQN 124
            +G      +   DL+ E L   +      L Q++A+D  +L  + +++ A  + D+   
Sbjct: 72  FVGVNDYNAQFGGDLTEEYLKARHDLNTRYLAQVRAIDLEQLPADLQLSYALFVYDREMA 131

Query: 125 EVDLYKYKDYYLPITAESGFHAYISSIAQ-------GRFNTQEDYQNYLDKLKALPNYFA 177
            VD   +   ++PI   S F++ + ++ Q         FNT +DY+N+  ++    ++  
Sbjct: 132 LVD-ETFPSRFMPI---SQFYSTVITMVQLGSGESAQPFNTVQDYRNWEQRVNGFIDWIQ 187

Query: 178 QQTYWLKQGLKEGITPPKATLKGFENSISAYILP-VEKSSYFKPFTQYPNHFTEAQKAQL 236
                + +G+   +  P+  ++     + A +     +S ++ P   +P  F++  KA+L
Sbjct: 188 LAENRMNEGIASKVVLPRVLVERIIPQLDAMLTTDASQSIFYSPINHFPEAFSDQDKAEL 247

Query: 237 TQQGRALVEQNVIPTYQAFYDFMTQEYMPNTRDNIAANSLPNGDAFYENRVRYYTTLDIT 296
           T   +A++ + ++P      D+  Q Y+P +R     + LPNG A+Y++    +TT  + 
Sbjct: 248 TASYQAMINERLVPALTGLRDYFKQTYLPKSRATDGWSGLPNGKAWYQHLANSHTTTTMP 307

Query: 297 SAEVHELGLKEVKRIRQEMEQVIKSVGFKGSFADFLYFLRTDPQFYATSADQLLKEAAFI 356
             E+H++GL EV RI  EM++V + VGFKG    F   L ++PQ++      L+     +
Sbjct: 308 VDEIHQIGLNEVARILSEMDKVREQVGFKGDLKAFFASLSSEPQYFYNDRQGLIDGYMVL 367

Query: 357 AKKADATLPKYFGKLPRKPYGIAPVPAEIAPKYTSGRYSGSNRD-DEPGYYWVNTYALDK 415
             K +  LP+YF  +P+  Y + PV +          Y     D   PG +++NTY L  
Sbjct: 368 KDKINQVLPQYFNVMPKADYVVKPVESFREQSAAGASYESPAVDGSRPGVFYINTYNLKA 427

Query: 416 RPLYELEALTLHEAVPGHHLQISLNSELSSQPDFRRYSYISAFGEGWGLYSEYLGLEAGF 475
           +P + +  L+LHEA PGHH QI++  EL+  P+F+R+S  +AF EGW LY+EYLG+E G 
Sbjct: 428 QPKWGMTTLSLHEAAPGHHFQIAIKQELTGVPEFQRFSGYTAFEEGWALYAEYLGIEMGL 487

Query: 476 YQDPYSNFGRLTYEMWRAARLVVDTGMHAQGWSREQAIEFMANNTALSLHNVTTEIDRYI 535
           + DPY  FG+L+ EM RA RLVVDTG+HA+GWSREQAI++M +N+ ++  ++  E++RY+
Sbjct: 488 FSDPYQYFGKLSDEMLRAMRLVVDTGLHAKGWSREQAIQYMKDNSPMAESDIIAEVERYM 547

Query: 536 TWPGQALSYKIGELTIKRLRAKAEQALGDKFDIRAFHDAVLENGSVPMSVLEQQINDFIE 595
             PGQALSYK+G+L I  LR +AE+ALGDKFD++AFHD +L +GS+PM+V+EQ+I+ +I 
Sbjct: 548 AIPGQALSYKVGQLKILALRERAEKALGDKFDLKAFHDQILTSGSLPMAVMEQKIDRWIA 607

Query: 596 AKKA 599
           A KA
Sbjct: 608 ATKA 611