Pairwise Alignments

Query, 601 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 596 a.a., putative lipoprotein (RefSeq) from Shewanella sp. ANA-3

 Score = 89.7 bits (221), Expect = 3e-22
 Identities = 128/602 (21%), Positives = 236/602 (39%), Gaps = 76/602 (12%)

Query: 24  AESASQTAVAITQSSVKTMAPAL--QAIVDQSWQLQLSASPEMAYGMGDKSAAGKLQDLS 81
           A++A  +AV+   + VKT A A   Q  +D  WQL    +P  A   G     G L+  +
Sbjct: 29  ADTAKSSAVS---ADVKTSAFAQFSQTFIDDLWQL----APTWALYSGKHVNDGYLEIPN 81

Query: 82  PEALAKLNQGQIAILVQLKALDRSKLSKEDKINAQILEDQLQNEV-DLYKYKDYYLPITA 140
             +  K      A   +LK  +   L+  + I+  ++++ L +   ++  +K +    ++
Sbjct: 82  EASRVKTLAFVKAQQAKLKQFELKSLTSNETIDYHLIDNLLNSMAWEITDFKSWQWDPSS 141

Query: 141 ESGFHAYISSIAQGRFNTQEDYQNYLDKLKALPNYFAQQTYWLKQGLKEGITPPKATLKG 200
            +    +   I +      +  ++ L +++ +P Y+A          +  I  P  TL+ 
Sbjct: 142 YNVAGGFAQIINENFAPLDDRLRSVLARMENIPAYYA--------AARSNIQQP--TLEH 191

Query: 201 FENSISAYILPVEKSSYFKPFTQYPNHFTEAQKAQLTQQGRALVEQNVIPTYQAFYDFMT 260
            E ++      ++    F  F+   +   +   + L+   ++L +       +A  + +T
Sbjct: 192 SELAV------MQNQGAFSVFSD--DLLKQVADSGLSDAEKSLFKSRFDTATKAINEHIT 243

Query: 261 Q-EYMPNTRDNIAANSLPNGDAFYENRVRYYTTLDITSAEVHELGLKEVKRIRQEMEQVI 319
                 +      A S   G+  YE +  +     +T+ ++++  + + +R++ EM ++ 
Sbjct: 244 WLNAQVSQLKKDGARSFRIGEELYEQKFAFDIQAGMTAKQLYQKAMADKERVQGEMAKIT 303

Query: 320 -----------KSVGFKGSFADFLYFLRTD----PQFYATSADQLLKEAAFIAKKADATL 364
                      K    K +    +  L T       F +    Q+ +   F+ KK   TL
Sbjct: 304 DKLWPKYFTTPKPADNKIAIRQLIDKLSTQHVKRDDFVSEVRKQIPELIEFVNKKDLVTL 363

Query: 365 PKYFGKLPRKPYGIAPVPAEIAPKYTSGRYSGSNRDDEPGYYWVNTYALD---------- 414
                  P+KP  +   P E    Y     S     D+ G  + N   LD          
Sbjct: 364 D------PKKPLVVRETP-EYMRGYAGASISAPGPYDKLGNTYYNVTPLDGMSDESAESY 416

Query: 415 --KRPLYELEALTLHEAVPGHHLQISLNSELSSQPDFRRYSYISAFGEGWGLYSEYLGLE 472
             +   + L+ L +HEA+PGH+ Q+  ++E  S    +      A  EGW +Y+E + LE
Sbjct: 417 LREYNHWILQILNIHEAIPGHYTQLVYSNESPSL--VKSLFGNGAMVEGWAVYTERMMLE 474

Query: 473 AGFYQDPYSNFGR---LTYEMWRA---ARLVVDTGMHAQGWSREQAIEFMANNTALSLHN 526
            G     Y NF     L Y  W        ++D  +H +G + EQAI  M +        
Sbjct: 475 EG-----YGNFEPEMWLMYYKWNLRVICNTILDYSIHVKGMTEEQAISLMMDEAFQQRAE 529

Query: 527 VTTEIDRYITWPGQALSYKIGELTIKRLRAKAEQALGDKFDIRAFHDAVLENGSVPMSVL 586
              +  R      Q  SY  G   I   R + +Q  G  FD++AFH+  L  GS P+  +
Sbjct: 530 AEGKWRRATLSQVQLTSYYSGYREIYDFREEYKQLKGKDFDLKAFHEKFLSYGSAPVKYI 589

Query: 587 EQ 588
            Q
Sbjct: 590 RQ 591