Pairwise Alignments

Query, 601 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 615 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3

 Score =  337 bits (863), Expect = 1e-96
 Identities = 211/612 (34%), Positives = 317/612 (51%), Gaps = 24/612 (3%)

Query: 5   FTPSLLICVLSACSTAKPPAESASQTAVAITQSSVKTMAPALQAIVDQSWQLQLSASPEM 64
           FT S L+ + S        + + +  +VA    S K       A+ +  +   + ASP  
Sbjct: 12  FTLSALLALPSYAVPTLSDSHNVASASVAAQSESEKA-----NALFEAIFMENIMASPIA 66

Query: 65  AYGMGDKSAAGKLQDLSPEALAKLNQGQIAILVQLKALDRSKLSKEDKINAQILEDQLQN 124
              MG K    K  D+  EA A+        L ++  LD SKL  + +++  +L   L N
Sbjct: 67  QTYMGIKQDYDKWDDIGDEADARELARTKKQLTEVNQLDASKLDPQTRLSLTLLTQNLNN 126

Query: 125 EVDLYKYKDYYLPITAESGFHAYISS--IAQGRFNTQEDYQNYLDKLKALPNYFAQQTYW 182
           ++  Y+++ +  P+    G H+ I+S  I Q +     D + Y+ +L  +P   +Q    
Sbjct: 127 DIKDYQWRYHNYPVNQMHGGHSMIASFLINQHQITDVSDAKAYISRLNGVPKRLSQLQQA 186

Query: 183 LKQGLKEGITPPKATLKGFENSISAYIL---PVEK---SSYFKPFTQYPN--HFTEAQKA 234
           L+    +GI  PK    G+  S S  I+   P +K   S+    F +  +    TEA+KA
Sbjct: 187 LEVRADKGIIAPKFVF-GYVISDSQNIIKGAPFDKGEDSALLADFRKKVSALSITEAEKA 245

Query: 235 QLTQQGRALVEQNVIPTYQAFYDFM-TQEYMPNTRDNIAANSLPNGDAFYENRVRYYTTL 293
           QL       +   V P Y+    ++ T E   +TRD +    LP+G+AFY N +   TT 
Sbjct: 246 QLIADAEKALVSQVEPAYKTLIAYIKTLEAKADTRDGVW--KLPDGEAFYNNALARTTTT 303

Query: 294 DITSAEVHELGLKEVKRIRQEMEQVIKSVGFKGSFADFLYFLRTDPQFY----ATSADQL 349
            +T+ E+H+LGL EV+RI  EM  ++K V F G+  +F  F+R DPQFY    A      
Sbjct: 304 QMTADEIHQLGLAEVERIHNEMRAIMKKVNFNGTLQEFFAFMRDDPQFYYPNTAEGKAAY 363

Query: 350 LKEAAFIAKKADATLPKYFGKLPRKPYGIAPVPAEIAPKYTSGRYSGSNRD-DEPGYYWV 408
           L +A  +     + L + F   P+    +  V A          Y     D   PG Y+ 
Sbjct: 364 LADATKLIDNMRSRLDEVFKVKPKAAMIVKQVEAFREKSAGKAFYEQPAPDGSRPGSYYA 423

Query: 409 NTYALDKRPLYELEALTLHEAVPGHHLQISLNSELSSQPDFRRYSYISAFGEGWGLYSEY 468
           N Y +   P Y++EAL  HE +PGHH+QI+++ EL   P FR++   +A+ EGWGLYSE 
Sbjct: 424 NLYDMKAMPKYQMEALAYHEGIPGHHMQIAISQELKDIPKFRKFGGYTAYIEGWGLYSES 483

Query: 469 LGLEAGFYQDPYSNFGRLTYEMWRAARLVVDTGMHAQGWSREQAIEFMANNTALSLHNVT 528
              E G Y DPYS+FGRL  E+WRA RLVVDTG+HA+ W+REQ I +  +NT  +  +  
Sbjct: 484 FPKEMGLYADPYSDFGRLAMELWRACRLVVDTGIHAKKWTREQGIAYYVDNTPNAKSDAK 543

Query: 529 TEIDRYITWPGQALSYKIGELTIKRLRAKAEQALGDKFDIRAFHDAVLENGSVPMSVLEQ 588
             ++R+I  P QA +YK+G + +  LR KAE+ LGDKFDIR FH  VL NG++P+ VLE+
Sbjct: 544 KMVERHIVMPSQATAYKVGMIKLLELRHKAEKQLGDKFDIRDFHTLVLANGALPLDVLEE 603

Query: 589 QINDFIEAKKAA 600
           Q++ +I +   A
Sbjct: 604 QVDQWIASVNKA 615