Pairwise Alignments

Query, 235 a.a., ABC transporter, permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 232 a.a., molybdate ABC transporter permease subunit from Vibrio cholerae E7946 ATCC 55056

 Score = 88.6 bits (218), Expect = 1e-22
 Identities = 67/213 (31%), Positives = 108/213 (50%), Gaps = 17/213 (7%)

Query: 24  WSIISVSFSVSFAALLITLVPSMVLGFVLAFAHFPGKWFVTNLVQTLQSIPTVVIGLLVY 83
           W+ +++S  V+  A L  L   +VL +VLA   F GK  + +LV     +P VVIG L+ 
Sbjct: 9   WAALALSLKVAGYATLWLLPIGIVLAWVLARTSFIGKGLIDSLVHLPLVLPPVVIGYLLL 68

Query: 84  LILTRNGPLGD-------LKWLFTQEGMILGQMLICAPVMIAMSQAAFTSVDRRAWETSR 136
           + + R G +G        L + F+  G +L  M+I  P+M+   + +  SVD++  + +R
Sbjct: 69  ISMGRQGFIGQWLYQVFGLSFSFSWRGAVLACMVIALPLMVRSIRLSLESVDQKLEQAAR 128

Query: 137 TLGASWAGAVWAVCRELRMP-LLLAIVAAFSRILTEVGCSMMVGGNILNVTRNIPTAI-- 193
           TLGAS     + +   L +P +L  ++ AF+R L E G ++    NI   T+ IP A+  
Sbjct: 129 TLGASPMRVFFTITLPLTLPGILTGVMLAFARSLGEFGATISFVSNIPGETQTIPLAMFT 188

Query: 194 ALETSKGDFAQAIALGLVLLILALILNFALGSL 226
            LET   +   A        + A+ +  ALGSL
Sbjct: 189 FLETPGSEMEAA-------RLCAISIAIALGSL 214