Pairwise Alignments

Query, 709 a.a., sensor histidine kinase (NCBI ptt file) from Shewanella oneidensis MR-1

Subject, 713 a.a., integral membrane sensor signal transduction histidine kinase (RefSeq) from Shewanella loihica PV-4

 Score = 1115 bits (2884), Expect = 0.0
 Identities = 567/703 (80%), Positives = 630/703 (89%)

Query: 1   MSFFTHFFGVSWQQMQAKVRYRILILTLLPILLTLVSLVFITIYWNISYTGKQLFMKVKA 60
           MSFF+  FGV+WQQ+QAKVRYRILILTLLPILLTLVSLVFITIYWNISYTGKQLFMKVKA
Sbjct: 1   MSFFSRLFGVNWQQLQAKVRYRILILTLLPILLTLVSLVFITIYWNISYTGKQLFMKVKA 60

Query: 61  DLAVAENTLQQVQVRQEKQLERVMTSWTFQNDFRPILSGALAHRASIDTFLHEQKKQLDL 120
           DL VA NTL  VQ +QE QLE V  SW FQN+FR + + + A R  +   L +++ +LDL
Sbjct: 61  DLTVASNTLISVQEKQENQLELVRASWEFQNEFRDLDTDSKAARTQLAELLKQKQAELDL 120

Query: 121 DFLRLVSVAEAAADPDLRQILPKIGGMLPYSGLMVLSRERLARIDPDLAQRASIPLLATL 180
           DFLRL+SV+EAA DPDLR +LPKI    P+SGLMVL  +RLAR+ P+L Q A I L+ T 
Sbjct: 121 DFLRLISVSEAAQDPDLRVMLPKIQDNQPFSGLMVLQPQRLARLAPNLEQEAVITLVDTP 180

Query: 181 RAQSPDKQVEERGLLSRSLLPIPDSEGKVAWYLDGGVLFNRDTRIVDHIRDLVYDKGTLP 240
           R+Q P K VE+RG+LSRSLLPI  S+G V WYLDGG+L NRD RIVDHIRDLVYDKGTLP
Sbjct: 181 RSQKPSKDVEKRGMLSRSLLPILGSDGTVGWYLDGGILLNRDIRIVDHIRDLVYDKGTLP 240

Query: 241 ERSIGTVTIFLDNIRVSTNVPLHFFPQPNESQGRALGSLVSEEVREKVLNHGELWVDRAF 300
           ERSIGTVTIFLDN R+STNVPL+FFPQ +E +GRALGSLVSEEVR+KVL  G LWVDRAF
Sbjct: 241 ERSIGTVTIFLDNTRISTNVPLNFFPQDSEKRGRALGSLVSEEVRQKVLVQGLLWVDRAF 300

Query: 301 VYNDWFISAYAPLEDIRGQRVGMIYTGFSESPFIHNYLLNIIELGTILMLVLLISGLLVY 360
           VYNDWFISAYAPL+DIRG+R+GMIYTGFSESPFIHNYLLNIIELGTILMLVLL+SGLLVY
Sbjct: 301 VYNDWFISAYAPLKDIRGERIGMIYTGFSESPFIHNYLLNIIELGTILMLVLLVSGLLVY 360

Query: 361 RGAYSLLQPIERIHHVVQAVQSGRNVRIGALGLDRDNELSNLAEQFDRMLDLLQRRNAQI 420
           RGAYSLLQPIERIHHVV+AVQSGRN+RIG+LGL+RDNEL+NLAEQFDRMLDLLQRRN+QI
Sbjct: 361 RGAYSLLQPIERIHHVVKAVQSGRNLRIGSLGLERDNELANLAEQFDRMLDLLQRRNSQI 420

Query: 421 QAAAEQLEMKVEERTRSLQDKTLELQRNVALLNETRQQLVTNEKLTALGELTAGIAHEIN 480
           QAAAEQLE+KVEERTRSLQ+KT ELQRNVALLNETRQQLVTNEKLTALGELTAGIAHEIN
Sbjct: 421 QAAAEQLEVKVEERTRSLQEKTEELQRNVALLNETRQQLVTNEKLTALGELTAGIAHEIN 480

Query: 481 NPTAVILGNMELLRYELGDKAEVVKEEIDLVIQQVGRISTIIRSLLQYSRPGEFNAPLEM 540
           NPTAVILGNMELL+ ELGDKAE V+EEID+VI+QVGRISTIIRSLLQYSRPGEFNAPLEM
Sbjct: 481 NPTAVILGNMELLKSELGDKAEDVEEEIDIVIEQVGRISTIIRSLLQYSRPGEFNAPLEM 540

Query: 541 HPITPIIEEMLVLVRHSIQKQEVVLITELNASCPVQVNRPQLLQVLINLVVNAAHAMDGK 600
           H +TPI+EEM +LVRHSI+KQEVVLI +LNAS P++VNRPQLLQVLINLVVNAAHAMDG+
Sbjct: 541 HQLTPIVEEMAILVRHSIKKQEVVLIQDLNASYPIEVNRPQLLQVLINLVVNAAHAMDGQ 600

Query: 601 GRIWVRTYDWVQQDIAIGVKIEVEDEGSGIEPEQLGRIFDPFYTTRKDGTGLGLSLSYGI 660
           GRIW+RTYDWVQ    IGVKIEVEDEG GI  EQLGRIFDPFYTTR+DGTGLGLSLSYGI
Sbjct: 601 GRIWIRTYDWVQGGEPIGVKIEVEDEGKGIPEEQLGRIFDPFYTTRQDGTGLGLSLSYGI 660

Query: 661 IKRIGGTIEVSSVLGKGSIFTIGLYHEAKEDHQNNPYDGLHFS 703
           IKRIGGTIEVSS +GKG++FTIGLYH+A +D  N PY+GLHFS
Sbjct: 661 IKRIGGTIEVSSTVGKGTLFTIGLYHKAIDDQFNPPYEGLHFS 703